Detailed information NTG0583380

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MW401_RS24840
• Genome accession: NZ_CP095510
• Coordinates: 5145739..5146764 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GN02270
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5140739..5151764

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW401_RS24820 (MW401_24810)	metJ	5141924..5142241 (+)	318	WP_059332050.1	met regulon transcriptional regulator MetJ	-
MW401_RS24825 (MW401_24815)	yiiX	5142301..5142909 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
MW401_RS24830 (MW401_24820)	rpmE	5142970..5143182 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MW401_RS24835 (MW401_24825)	priA	5143385..5145583 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
MW401_RS24840 (MW401_24830)	cytR	5145739..5146764 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MW401_RS24845 (MW401_24835)	ftsN	5146856..5147815 (+)	960	WP_000068844.1	cell division protein FtsN	-
MW401_RS24850 (MW401_24840)	hslV	5147908..5148438 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MW401_RS24855 (MW401_24845)	hslU	5148448..5149779 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MW401_RS24860 (MW401_24850)	menA	5149846..5150772 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MW401_RS24865 (MW401_24855)	rraA	5150865..5151350 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=583380 MW401_RS24840 WP_000644904.1 5145739..5146764(+) (cytR) [Escherichia coli strain GN02270]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=583380 MW401_RS24840 WP_000644904.1 5145739..5146764(+) (cytR) [Escherichia coli strain GN02270]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628