Detailed information NTG0583265

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MW398_RS15185
• Genome accession: NZ_CP095505
• Coordinates: 2886276..2887301 (-)
• Length: 341 a.a.
• NCBI ID: WP_021523626.1
• Uniprot ID: -
• Organism: Escherichia coli strain GN02050
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2881276..2892301

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW398_RS15155 (MW398_15145)	zapB	2881360..2881605 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
MW398_RS15160 (MW398_15150)	rraA	2881690..2882175 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MW398_RS15165 (MW398_15155)	menA	2882268..2883194 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MW398_RS15170 (MW398_15160)	hslU	2883261..2884592 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MW398_RS15175 (MW398_15165)	hslV	2884602..2885132 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MW398_RS15180 (MW398_15170)	ftsN	2885225..2886184 (-)	960	WP_000068834.1	cell division protein FtsN	-
MW398_RS15185 (MW398_15175)	cytR	2886276..2887301 (-)	1026	WP_021523626.1	DNA-binding transcriptional regulator CytR	Regulator
MW398_RS15190 (MW398_15180)	priA	2887457..2889655 (-)	2199	WP_021523627.1	primosomal protein N'	Machinery gene
MW398_RS15195 (MW398_15185)	rpmE	2889858..2890070 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
MW398_RS15200 (MW398_15190)	yiiX	2890131..2890739 (-)	609	WP_021523628.1	YiiX family permuted papain-like enzyme	-
MW398_RS15205 (MW398_15195)	metJ	2890799..2891116 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37835.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=583265 MW398_RS15185 WP_021523626.1 2886276..2887301(-) (cytR) [Escherichia coli strain GN02050]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQSTRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=583265 MW398_RS15185 WP_021523626.1 2886276..2887301(-) (cytR) [Escherichia coli strain GN02050]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGTCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCTCAGCCTATGGGTCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GAATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.478	98.24	0.633
cytR	Vibrio cholerae C6706	65.749	95.894	0.63