Detailed information NTG0583250

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MW398_RS13090
• Genome accession: NZ_CP095505
• Coordinates: 2446699..2447682 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain GN02050
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2441699..2452682

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW398_RS13065 (MW398_13055)	bcsF	2441860..2442051 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
MW398_RS13070 (MW398_13060)	bcsG	2442048..2443727 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
MW398_RS13075 (MW398_13065)	ldrD	2443814..2443921 (-)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
MW398_RS13080 (MW398_13070)	yhjV	2444397..2445668 (+)	1272	WP_001334058.1	aromatic amino acid transport family protein	-
MW398_RS13085 (MW398_13075)	dppF	2445698..2446702 (-)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MW398_RS13090 (MW398_13080)	amiE	2446699..2447682 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
MW398_RS13095 (MW398_13085)	dppC	2447693..2448595 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MW398_RS13100 (MW398_13090)	dppB	2448605..2449624 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
MW398_RS13105 (MW398_13095)	-	2449642..2449869 (+)	228	WP_000198576.1	hypothetical protein	-
MW398_RS13110 (MW398_13100)	dppA	2449931..2451538 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=583250 MW398_RS13090 WP_001196477.1 2446699..2447682(-) (amiE) [Escherichia coli strain GN02050]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=583250 MW398_RS13090 WP_001196477.1 2446699..2447682(-) (amiE) [Escherichia coli strain GN02050]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGATCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404