Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KU660_RS16175 Genome accession   NZ_CP077823
Coordinates   3323730..3324326 (-) Length   198 a.a.
NCBI ID   WP_136032085.1    Uniprot ID   A0A7U3F210
Organism   Klebsiella africana strain FF1019     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3318730..3329326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU660_RS16160 (KU660_16115) helD 3318938..3320992 (-) 2055 WP_251354359.1 DNA helicase IV -
  KU660_RS16165 (KU660_16120) - 3321117..3321563 (+) 447 WP_004224032.1 YccF domain-containing protein -
  KU660_RS16170 (KU660_16125) yccS 3321581..3323716 (+) 2136 WP_136032087.1 YccS family putative transporter -
  KU660_RS16175 (KU660_16130) sxy/tfoX 3323730..3324326 (-) 597 WP_136032085.1 TfoX/Sxy family DNA transformation protein Regulator
  KU660_RS16180 (KU660_16135) sulA 3324683..3325192 (+) 510 WP_136032083.1 SOS-induced cell division inhibitor SulA -
  KU660_RS16185 (KU660_16140) ompA 3325545..3326597 (+) 1053 WP_136032081.1 porin OmpA -
  KU660_RS16190 (KU660_16145) matP 3326706..3327158 (-) 453 WP_251354360.1 macrodomain Ter protein MatP -
  KU660_RS16195 (KU660_16150) - 3327344..3329101 (+) 1758 WP_251354361.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22756.39 Da        Isoelectric Point: 9.6852

>NTDB_id=583230 KU660_RS16175 WP_136032085.1 3323730..3324326(-) (sxy/tfoX) [Klebsiella africana strain FF1019]
MRKLVCPRLPQFQACVSALGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHHNPLLMLRRHGRIVPLK
YYQIDDALWRDEKQLFRLSLLSWQSAQREKYHRRDSGRLKDLPNISFHMELQLIHAGIPDVRTLREIGAQQAWLKLRENN
ASLSPSVLLGLEAAIVGIHVAALPTPRRQELMEWAENR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=583230 KU660_RS16175 WP_136032085.1 3323730..3324326(-) (sxy/tfoX) [Klebsiella africana strain FF1019]
ATGAGAAAACTCGTATGTCCGCGGCTTCCGCAATTTCAGGCCTGCGTCTCAGCGCTGGGTCAATTACATACCCGCCCGCT
CTTTGGCGGATACAGTCTGGCCATTGATGATACGGTGTTTGCGATGGTGGCAGAGGGAAATATCTATCTGAAGGCCTGCG
AGCAGAGCGCCGCCTACCGGGTTGAACACCATAATCCTTTATTGATGTTGCGTCGGCATGGGCGCATTGTGCCGCTGAAA
TATTATCAGATTGACGACGCCTTATGGCGAGATGAGAAACAGCTCTTTCGCCTGTCGCTGTTGTCGTGGCAGAGTGCCCA
GCGCGAAAAGTATCACCGCCGGGATTCTGGCCGTTTGAAGGATTTACCCAACATCAGCTTTCATATGGAATTGCAGCTGA
TTCATGCGGGCATACCGGATGTCAGGACGCTTCGGGAGATTGGCGCCCAGCAAGCCTGGCTGAAGCTACGCGAAAACAAT
GCTTCTTTGTCACCCAGCGTACTGCTGGGGTTGGAAGCCGCGATTGTCGGGATCCATGTCGCCGCGCTCCCGACGCCGCG
GCGTCAGGAGCTGATGGAATGGGCGGAGAATCGCTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U3F210

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

50.254

99.495

0.5