Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KU667_RS15140 Genome accession   NZ_CP077814
Coordinates   3167528..3168124 (+) Length   198 a.a.
NCBI ID   WP_023341259.1    Uniprot ID   -
Organism   Klebsiella pneumoniae strain FF1076     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3162528..3173124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU667_RS15120 (KU667_15100) - 3162720..3164477 (-) 1758 WP_004147851.1 AAA family ATPase -
  KU667_RS15125 (KU667_15105) matP 3164663..3165115 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  KU667_RS15130 (KU667_15110) ompA 3165247..3166317 (-) 1071 WP_002898408.1 porin OmpA -
  KU667_RS15135 (KU667_15115) sulA 3166670..3167179 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  KU667_RS15140 (KU667_15120) sxy/tfoX 3167528..3168124 (+) 597 WP_023341259.1 TfoX/Sxy family DNA transformation protein Regulator
  KU667_RS15145 (KU667_15125) yccS 3168138..3170273 (-) 2136 WP_002898422.1 YccS family putative transporter -
  KU667_RS15150 (KU667_15130) - 3170291..3170737 (-) 447 WP_002898425.1 YccF domain-containing protein -
  KU667_RS15155 (KU667_15135) helD 3170862..3172916 (+) 2055 WP_251340872.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22536.09 Da        Isoelectric Point: 10.2327

>NTDB_id=583139 KU667_RS15140 WP_023341259.1 3167528..3168124(+) (sxy/tfoX) [Klebsiella pneumoniae strain FF1076]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNHRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIGGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=583139 KU667_RS15140 WP_023341259.1 3167528..3168124(+) (sxy/tfoX) [Klebsiella pneumoniae strain FF1076]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACCACCGACGGGCATCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGGCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.795

98.485

0.51