Detailed information NTG0582892

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MWN28_RS01040
• Genome accession: NZ_CP095448
• Coordinates: 232654..233637 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196484.1
• Uniprot ID: -
• Organism: Escherichia coli strain LS45
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 227654..238637

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWN28_RS01025 (MWN28_01025)	dppA	228954..230561 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
MWN28_RS01030 (MWN28_01030)	dppB	230712..231731 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
MWN28_RS01035 (MWN28_01035)	dppC	231741..232643 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MWN28_RS01040 (MWN28_01040)	amiE	232654..233637 (+)	984	WP_001196484.1	dipeptide ABC transporter ATP-binding protein	Regulator
MWN28_RS01045 (MWN28_01045)	dppF	233634..234638 (+)	1005	WP_000107033.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MWN28_RS01050 (MWN28_01050)	yhjV	234668..235939 (-)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
MWN28_RS01055 (MWN28_01055)	-	236415..236522 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MWN28_RS01060 (MWN28_01060)	-	236899..237006 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
MWN28_RS01065 (MWN28_01065)	-	237383..237490 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
MWN28_RS01070 (MWN28_01070)	-	237867..237974 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35816.35 Da
• Isoelectric Point: 6.5813

>NTDB_id=582892 MWN28_RS01040 WP_001196484.1 232654..233637(+) (amiE) [Escherichia coli strain LS45]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=582892 MWN28_RS01040 WP_001196484.1 232654..233637(+) (amiE) [Escherichia coli strain LS45]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTAGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGATAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGTCCGAACGGCTGCCTGCTTAACCCGCGCTGTCCCTACGCCA
CTGACAAATGCCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCACTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404