Detailed information    

insolico Bioinformatically predicted

Overview

Name   recR   Type   Machinery gene
Locus tag   MU524_RS18715 Genome accession   NZ_CP095271
Coordinates   3753841..3754446 (-) Length   201 a.a.
NCBI ID   WP_001195025.1    Uniprot ID   P0A7H7
Organism   Escherichia coli strain EC9682     
Function   promote later steps in plasmid transformation (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3748841..3759446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MU524_RS18695 (MU524_18705) aes 3748982..3749941 (+) 960 WP_000801795.1 acetyl esterase -
  MU524_RS18700 (MU524_18710) hemH 3749938..3750900 (-) 963 WP_001250114.1 ferrochelatase -
  MU524_RS18705 (MU524_18715) adk 3751032..3751676 (-) 645 WP_001331495.1 adenylate kinase -
  MU524_RS18710 (MU524_18720) htpG 3751857..3753731 (-) 1875 WP_000678211.1 molecular chaperone HtpG -
  MU524_RS18715 (MU524_18725) recR 3753841..3754446 (-) 606 WP_001195025.1 recombination mediator RecR Machinery gene
  MU524_RS18720 (MU524_18730) ybaB 3754446..3754775 (-) 330 WP_000467098.1 YbaB/EbfC family nucleoid-associated protein -
  MU524_RS18725 (MU524_18735) dnaX 3754828..3756759 (-) 1932 WP_000122015.1 DNA polymerase III subunit gamma/tau -
  MU524_RS18730 (MU524_18740) apt 3756888..3757439 (-) 552 WP_000127356.1 adenine phosphoribosyltransferase -
  MU524_RS18735 (MU524_18745) ybaN 3757592..3757969 (-) 378 WP_001188900.1 DUF454 family protein -
  MU524_RS18740 (MU524_18750) priC 3758039..3758566 (+) 528 WP_000844868.1 primosomal replication protein N'' -
  MU524_RS18745 (MU524_18755) rsmS 3758580..3758741 (+) 162 WP_000051146.1 pleiotropic regulatory protein RsmS -
  MU524_RS26740 - 3758794..3758892 (-) 99 Protein_3680 hypothetical protein -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 21963.00 Da        Isoelectric Point: 4.9097

>NTDB_id=582858 MU524_RS18715 WP_001195025.1 3753841..3754446(-) (recR) [Escherichia coli strain EC9682]
MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQEN
GQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL
CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF

Nucleotide


Download         Length: 606 bp        

>NTDB_id=582858 MU524_RS18715 WP_001195025.1 3753841..3754446(-) (recR) [Escherichia coli strain EC9682]
ATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCG
TATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAA
TCGGTCACTGCGCCGATTGCCGCACCTTCACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCACGTCGTCAGGAAAAC
GGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATTTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTTGT
GTTGATGGGACACCTGTCACCGCTGGACGGCATCGGTCCTGATGATATCGGGCTTGATCGTCTGGAACAGCGTCTGGCAG
AGGAAAAAATCACTGAAGTGATCCTCGCCACCAACCCCACGGTTGAAGGTGAAGCTACCGCTAACTACATTGCCGAGCTT
TGTGCGCAATATGACGTGGAAGCCAGCCGAATCGCTCATGGCGTACCGGTTGGCGGCGAACTGGAAATGGTCGATGGCAC
CACGCTGTCACACTCCCTTGCCGGGCGTCATAAGATTCGTTTTTAA

Domains

Predicted by InterProScan.

RecR protein (RecR_ZnF)

(41-77)

Toprim domain (Toprim_4)

(81-172)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P0A7H7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recR Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

45.226

99.005

0.448
  recR Bacillus subtilis subsp. subtilis str. 168

44.724

99.005

0.443