Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   MUY23_RS05510 Genome accession   NZ_CP095162
Coordinates   1089827..1090309 (+) Length   160 a.a.
NCBI ID   WP_002938080.1    Uniprot ID   -
Organism   Streptococcus suis strain TJS75     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1084827..1095309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUY23_RS05485 - 1086075..1087385 (-) 1311 WP_002938090.1 GntP family permease -
  MUY23_RS05490 folK 1087436..1087924 (-) 489 WP_009910002.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  MUY23_RS05495 folB 1087921..1088283 (-) 363 WP_002938086.1 dihydroneopterin aldolase -
  MUY23_RS05500 folP 1088276..1089088 (-) 813 WP_002938084.1 dihydropteroate synthase -
  MUY23_RS05505 folE 1089097..1089660 (-) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  MUY23_RS05510 mutX 1089827..1090309 (+) 483 WP_002938080.1 8-oxo-dGTP diphosphatase Machinery gene
  MUY23_RS05515 - 1090358..1091035 (-) 678 WP_002938079.1 DUF4956 domain-containing protein -
  MUY23_RS05520 - 1091022..1091765 (-) 744 WP_002938076.1 polyphosphate polymerase domain-containing protein -
  MUY23_RS05525 - 1091958..1092260 (+) 303 WP_002938072.1 hypothetical protein -
  MUY23_RS05530 - 1092281..1092547 (-) 267 WP_002938070.1 DUF2087 domain-containing protein -
  MUY23_RS05535 pheT 1092602..1095001 (-) 2400 WP_002938067.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18496.88 Da        Isoelectric Point: 4.5662

>NTDB_id=582746 MUY23_RS05510 WP_002938080.1 1089827..1090309(+) (mutX) [Streptococcus suis strain TJS75]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREIFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGGKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=582746 MUY23_RS05510 WP_002938080.1 1089827..1090309(+) (mutX) [Streptococcus suis strain TJS75]
ATGACCAAGAAACCCGTCCAACTCGCTACGATTTGCTACATTGATAATGGTAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAACGATGTCCATCAAGGAAAATGGATTGGAGTTGGTGGCAAACTAGAACCCGGCGAAACGCCACAGGCTTGTG
CCATTCGAGAAATCTTTGAGGAAACTGGGCTTACTGTAACAAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAGTGGGTTCCCTATGACCAAGTCTTGTCCAAACCAACTTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGGCAAACTGCTTGATTACAGTGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.046

95.625

0.775