Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   KTE72_RS10910 Genome accession   NZ_CP077741
Coordinates   2183776..2184492 (+) Length   238 a.a.
NCBI ID   WP_217659433.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NL1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2178776..2189492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTE72_RS10880 (KTE72_10800) - 2179043..2179669 (+) 627 WP_000522384.1 nitroreductase family protein -
  KTE72_RS10885 (KTE72_10805) - 2179977..2180762 (+) 786 WP_000867947.1 carbon-nitrogen family hydrolase -
  KTE72_RS14755 hld 2181364..2181444 (-) 81 WP_000046022.1 delta-hemolysin -
  KTE72_RS10895 (KTE72_10815) agrB 2181734..2182303 (+) 570 WP_001105708.1 accessory gene regulator AgrB -
  KTE72_RS10900 (KTE72_10820) agrD 2182300..2182440 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  KTE72_RS10905 (KTE72_10825) agrC 2182465..2183757 (+) 1293 WP_001825886.1 quorum-sensing sensor histidine kinase AgrC -
  KTE72_RS10910 (KTE72_10830) agrA 2183776..2184492 (+) 717 WP_217659433.1 quorum-sensing response regulator AgrA Regulator
  KTE72_RS10915 (KTE72_10835) - 2184866..2185825 (-) 960 WP_001253294.1 carbohydrate kinase family protein -
  KTE72_RS10920 (KTE72_10840) - 2185822..2187306 (-) 1485 WP_000141407.1 sucrose-6-phosphate hydrolase -
  KTE72_RS10925 (KTE72_10845) - 2187455..2188405 (-) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27931.98 Da        Isoelectric Point: 6.0927

>NTDB_id=582631 KTE72_RS10910 WP_217659433.1 2183776..2184492(+) (agrA) [Staphylococcus aureus strain NL1]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESLTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=582631 KTE72_RS10910 WP_217659433.1 2183776..2184492(+) (agrA) [Staphylococcus aureus strain NL1]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATTAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGTCATAATATCGAATCTATTG
ATTCGAAAGAGCGTATTGTTTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-237)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

99.58

100

0.996