Detailed information
Bioinformatically predicted
Overview
| Name | ccrB | Type | Machinery gene |
| Locus tag | KTE72_RS00285 | Genome accession | NZ_CP077741 |
| Coordinates | 72561..74189 (-) | Length | 542 a.a. |
| NCBI ID | WP_001186604.1 | Uniprot ID | Q8VUV3 |
| Organism | Staphylococcus aureus strain NL1 | ||
| Function | promote SCCmec transfer (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| SCCmec | 41427..81167 | 72561..74189 | within | 0 |
Gene organization within MGE regions
Location: 41427..81167
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KTE72_RS00165 (KTE72_00165) | ccrC | 41427..43106 (+) | 1680 | WP_031863960.1 | cassette chromosome recombinase CcrC | - |
| KTE72_RS00170 (KTE72_00170) | - | 43195..43533 (+) | 339 | WP_031863961.1 | SAUGI family uracil-DNA glycosylase inhibitor | - |
| KTE72_RS00175 (KTE72_00175) | - | 43629..43940 (+) | 312 | WP_031863962.1 | DUF960 domain-containing protein | - |
| KTE72_RS00180 (KTE72_00180) | - | 43956..44465 (+) | 510 | WP_031863963.1 | DUF1643 domain-containing protein | - |
| KTE72_RS00185 (KTE72_00185) | - | 44480..44701 (+) | 222 | WP_031863964.1 | hypothetical protein | - |
| KTE72_RS00190 (KTE72_00190) | - | 44775..47894 (-) | 3120 | WP_031863965.1 | type I restriction endonuclease subunit R | - |
| KTE72_RS00195 (KTE72_00195) | - | 47878..49143 (-) | 1266 | WP_049948422.1 | restriction endonuclease subunit S | - |
| KTE72_RS00200 (KTE72_00200) | - | 49133..50647 (-) | 1515 | WP_031863967.1 | type I restriction-modification system subunit M | - |
| KTE72_RS00205 (KTE72_00205) | - | 51449..58123 (+) | 6675 | WP_223617627.1 | putative Ig domain-containing protein | - |
| KTE72_RS00210 (KTE72_00210) | - | 58307..59571 (-) | 1265 | Protein_39 | ISL3 family transposase | - |
| KTE72_RS00215 (KTE72_00215) | - | 59754..60113 (+) | 360 | WP_223596994.1 | antibiotic biosynthesis monooxygenase family protein | - |
| KTE72_RS00220 (KTE72_00220) | - | 60565..61820 (+) | 1256 | Protein_41 | MrcB family domain-containing protein | - |
| KTE72_RS00225 (KTE72_00225) | - | 62235..62474 (+) | 240 | WP_001282728.1 | hypothetical protein | - |
| KTE72_RS00230 (KTE72_00230) | - | 62506..63180 (-) | 675 | WP_001106057.1 | IS6-like element IS257 family transposase | - |
| KTE72_RS00235 (KTE72_00235) | - | 63216..63605 (+) | 390 | WP_020444595.1 | hydroxymethylglutaryl-CoA synthase | - |
| KTE72_RS00240 (KTE72_00240) | - | 64482..65225 (+) | 744 | WP_000958858.1 | glycerophosphoryl diester phosphodiesterase | - |
| KTE72_RS00245 (KTE72_00245) | - | 65322..65750 (+) | 429 | WP_000872606.1 | MaoC family dehydratase | - |
| KTE72_RS00250 (KTE72_00250) | mecA | 65796..67805 (-) | 2010 | WP_001801873.1 | PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA | - |
| KTE72_RS00255 (KTE72_00255) | - | 67902..68888 (+) | 987 | WP_001549960.1 | beta-lactam sensor/signal transducer MecR1 | - |
| KTE72_RS00260 (KTE72_00260) | - | 68878..69120 (+) | 243 | Protein_49 | type I restriction enzyme endonuclease domain-containing protein | - |
| KTE72_RS00265 (KTE72_00265) | - | 69111..70721 (-) | 1611 | Protein_50 | IS1182 family transposase | - |
| KTE72_RS00270 (KTE72_00270) | - | 70770..71276 (-) | 507 | WP_001092189.1 | DUF1643 domain-containing protein | - |
| KTE72_RS00275 (KTE72_00275) | - | 71291..71602 (-) | 312 | WP_000700851.1 | DUF960 family protein | - |
| KTE72_RS00280 (KTE72_00280) | - | 71689..72039 (-) | 351 | WP_000849672.1 | SAUGI family uracil-DNA glycosylase inhibitor | - |
| KTE72_RS00285 (KTE72_00285) | ccrB | 72561..74189 (-) | 1629 | WP_001186604.1 | cassette chromosome recombinase CcrB | Machinery gene |
| KTE72_RS00290 (KTE72_00290) | ccrA | 74211..75560 (-) | 1350 | WP_000815652.1 | cassette chromosome recombinase CcrA | Machinery gene |
| KTE72_RS00295 (KTE72_00295) | cch1 | 75794..77581 (-) | 1788 | WP_000122621.1 | cassette chromosome replicative helicase | - |
| KTE72_RS00300 (KTE72_00300) | ssb | 77581..77871 (-) | 291 | WP_001036437.1 | cassette chromosome ssDNA-binding protein | - |
| KTE72_RS00305 (KTE72_00305) | - | 78010..79059 (+) | 1050 | WP_000613248.1 | hypothetical protein | - |
| KTE72_RS00310 (KTE72_00310) | - | 79677..81167 (+) | 1491 | WP_000554504.1 | RNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 542 a.a. Molecular weight: 62650.85 Da Isoelectric Point: 9.9805
>NTDB_id=582593 KTE72_RS00285 WP_001186604.1 72561..74189(-) (ccrB) [Staphylococcus aureus strain NL1]
MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMNRPELQRMLKDAKEGNIDCVM
IYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTSSGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGN
LPLGYDKIPDSKHELMINQHEANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGIIHCPQCGAPMAASNTTNTLKD
GTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQILEIVKSDKVIQRVVARVNQENKVDGAALHHDIAYKQQQYD
EVQTKLNNLIKTIEDNPDLTSVIRPSIQKYEKQLNDITNQINQLKNQQNEDKSLFDAKQISKLLQHIFQDIKHMEKSRLK
ALYLSVIDRINIRKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYLTI
MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYADRGISGKSMNRPELQRMLKDAKEGNIDCVM
IYKTNRLARNTSDLLKIVEDLHKQNVEFFSLSERMEVNTSSGKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGN
LPLGYDKIPDSKHELMINQHEANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAK
YKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGIIHCPQCGAPMAASNTTNTLKD
GTKKRIRYYSCSNFRNKGSKVCSANSVRADVIEDYVMKQILEIVKSDKVIQRVVARVNQENKVDGAALHHDIAYKQQQYD
EVQTKLNNLIKTIEDNPDLTSVIRPSIQKYEKQLNDITNQINQLKNQQNEDKSLFDAKQISKLLQHIFQDIKHMEKSRLK
ALYLSVIDRINIRKDGNHKKQFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYLTI
Nucleotide
Download Length: 1629 bp
>NTDB_id=582593 KTE72_RS00285 WP_001186604.1 72561..74189(-) (ccrB) [Staphylococcus aureus strain NL1]
ATGCAACAACTTAAAACAAAACGTGTCGGTATCTATGTACGTGTATCAACAGAAATGCAAAGCACAGAAGGTTATAGTAT
CGACGGACAAATCAATCAAATCAAAGAATACTGTGACTTCCATCATTTTGAAGTTAAAGATATATACGCTGATCGTGGTA
TTTCAGGTAAATCTATGAACAGACCTGAGCTCCAACGTATGTTGAAAGATGCAAAAGAAGGCAATATAGATTGTGTTATG
ATCTACAAAACAAACCGATTAGCTCGTAATACATCGGATCTTCTGAAAATCGTCGAAGATTTGCATAAACAAAATGTCGA
ATTTTTCAGTTTATCAGAGCGTATGGAAGTCAATACTTCTTCTGGTAAACTCATGTTACAAATACTTGCGAGTTTCTCAG
AATTCGAACGTAATAACATTGTCGAGAATGTATTTATGGGGCAAACGAGACGTGCCCAAGAAGGCTATTATCAAGGCAAT
TTACCACTAGGTTATGACAAAATACCAGATAGTAAACACGAGCTAATGATTAACCAACATGAAGCTAATATTGTAAAATA
TATATTCGAGTCCTATGCCAAAGGACATGGCTATCGTAAAATAGCCAATGCATTGAATCACAAAGGCTATGTCACTAAAA
AGGGTAAACCTTTTAGTATTAGTTCTATCACATATATATTAGCTAACCCATTCTATATCGGCAAAATTCAATTTGCGAAA
TACAAAGATTGGAGTGAAAAACGTCGTAAAGGGCTGAATGATAAACCAGTGATAGCTGAAGGTAAGCATTCCCCCATTAT
TAATCAAGATTTATGGGATAAAGTACAAATGCGTAAAAAACAAGTCAGTCAAAAACCCCAAGTTCATGGTAAAGGAACGA
ATCTGCTTACAGGCATTATCCATTGTCCCCAATGTGGCGCACCTATGGCAGCAAGCAATACAACGAATACACTTAAAGAT
GGGACCAAGAAACGTATTCGTTACTATTCATGTAGTAATTTTCGGAACAAGGGTTCCAAAGTATGTTCGGCAAACAGTGT
AAGAGCTGATGTGATTGAAGATTATGTAATGAAGCAAATACTCGAAATAGTCAAAAGTGATAAAGTCATTCAACGCGTTG
TAGCACGTGTTAATCAAGAAAATAAAGTTGATGGCGCTGCACTTCATCACGATATTGCTTATAAGCAACAACAATATGAT
GAAGTACAAACCAAACTAAATAACTTGATTAAAACCATAGAGGATAATCCGGACTTAACATCAGTAATCAGACCAAGTAT
TCAAAAATATGAAAAGCAACTCAATGACATTACGAATCAAATCAACCAACTCAAAAATCAACAAAATGAAGATAAGTCTT
TATTTGATGCCAAACAAATCAGTAAACTATTACAACACATCTTTCAAGATATTAAGCACATGGAAAAATCTCGACTCAAA
GCATTGTACCTATCAGTGATTGATCGTATTAATATTAGAAAAGATGGTAATCATAAAAAACAATTCTATGTCACACTCAA
ACTTAATAACGAAATCATTAAACAACTTTTCAATAATAAACAACTCGACGAAGTGCATCTCAGCACTTCGTCTTTATTTT
TGCCCCAAACACTATATCTTACTATTTAG
ATGCAACAACTTAAAACAAAACGTGTCGGTATCTATGTACGTGTATCAACAGAAATGCAAAGCACAGAAGGTTATAGTAT
CGACGGACAAATCAATCAAATCAAAGAATACTGTGACTTCCATCATTTTGAAGTTAAAGATATATACGCTGATCGTGGTA
TTTCAGGTAAATCTATGAACAGACCTGAGCTCCAACGTATGTTGAAAGATGCAAAAGAAGGCAATATAGATTGTGTTATG
ATCTACAAAACAAACCGATTAGCTCGTAATACATCGGATCTTCTGAAAATCGTCGAAGATTTGCATAAACAAAATGTCGA
ATTTTTCAGTTTATCAGAGCGTATGGAAGTCAATACTTCTTCTGGTAAACTCATGTTACAAATACTTGCGAGTTTCTCAG
AATTCGAACGTAATAACATTGTCGAGAATGTATTTATGGGGCAAACGAGACGTGCCCAAGAAGGCTATTATCAAGGCAAT
TTACCACTAGGTTATGACAAAATACCAGATAGTAAACACGAGCTAATGATTAACCAACATGAAGCTAATATTGTAAAATA
TATATTCGAGTCCTATGCCAAAGGACATGGCTATCGTAAAATAGCCAATGCATTGAATCACAAAGGCTATGTCACTAAAA
AGGGTAAACCTTTTAGTATTAGTTCTATCACATATATATTAGCTAACCCATTCTATATCGGCAAAATTCAATTTGCGAAA
TACAAAGATTGGAGTGAAAAACGTCGTAAAGGGCTGAATGATAAACCAGTGATAGCTGAAGGTAAGCATTCCCCCATTAT
TAATCAAGATTTATGGGATAAAGTACAAATGCGTAAAAAACAAGTCAGTCAAAAACCCCAAGTTCATGGTAAAGGAACGA
ATCTGCTTACAGGCATTATCCATTGTCCCCAATGTGGCGCACCTATGGCAGCAAGCAATACAACGAATACACTTAAAGAT
GGGACCAAGAAACGTATTCGTTACTATTCATGTAGTAATTTTCGGAACAAGGGTTCCAAAGTATGTTCGGCAAACAGTGT
AAGAGCTGATGTGATTGAAGATTATGTAATGAAGCAAATACTCGAAATAGTCAAAAGTGATAAAGTCATTCAACGCGTTG
TAGCACGTGTTAATCAAGAAAATAAAGTTGATGGCGCTGCACTTCATCACGATATTGCTTATAAGCAACAACAATATGAT
GAAGTACAAACCAAACTAAATAACTTGATTAAAACCATAGAGGATAATCCGGACTTAACATCAGTAATCAGACCAAGTAT
TCAAAAATATGAAAAGCAACTCAATGACATTACGAATCAAATCAACCAACTCAAAAATCAACAAAATGAAGATAAGTCTT
TATTTGATGCCAAACAAATCAGTAAACTATTACAACACATCTTTCAAGATATTAAGCACATGGAAAAATCTCGACTCAAA
GCATTGTACCTATCAGTGATTGATCGTATTAATATTAGAAAAGATGGTAATCATAAAAAACAATTCTATGTCACACTCAA
ACTTAATAACGAAATCATTAAACAACTTTTCAATAATAAACAACTCGACGAAGTGCATCTCAGCACTTCGTCTTTATTTT
TGCCCCAAACACTATATCTTACTATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ccrB | Staphylococcus aureus N315 |
97.417 |
100 |
0.974 |