Detailed information NTG0582552

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MU414_RS23150
• Genome accession: NZ_CP095137
• Coordinates: 4758382..4759407 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain Iso00225
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4753382..4764407

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MU414_RS23130	metJ	4754567..4754884 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MU414_RS23135	yiiX	4754944..4755552 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
MU414_RS23140	rpmE	4755613..4755825 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MU414_RS23145	priA	4756028..4758226 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
MU414_RS23150	cytR	4758382..4759407 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
MU414_RS23155	ftsN	4759499..4760458 (+)	960	WP_000068834.1	cell division protein FtsN	-
MU414_RS23160	hslV	4760551..4761081 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MU414_RS23165	hslU	4761091..4762422 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MU414_RS23170	menA	4762489..4763415 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MU414_RS23175	rraA	4763508..4763993 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MU414_RS23180	zapB	4764078..4764323 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=582552 MU414_RS23150 WP_000644908.1 4758382..4759407(+) (cytR) [Escherichia coli strain Iso00225]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=582552 MU414_RS23150 WP_000644908.1 4758382..4759407(+) (cytR) [Escherichia coli strain Iso00225]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625