Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | DAX63_RS15095 | Genome accession | NZ_CP077711 |
| Coordinates | 3031342..3031947 (-) | Length | 201 a.a. |
| NCBI ID | WP_001202375.1 | Uniprot ID | A0A5I0N148 |
| Organism | Salmonella enterica subsp. enterica strain CFSAN058606 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 3023082..3065554 | 3031342..3031947 | within | 0 |
Gene organization within MGE regions
Location: 3023082..3065554
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DAX63_RS15055 (DAX63_015055) | rlmI | 3023090..3024301 (+) | 1212 | WP_000140480.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| DAX63_RS15060 (DAX63_015060) | hspQ | 3024359..3024676 (+) | 318 | WP_000561983.1 | heat shock protein HspQ | - |
| DAX63_RS15065 (DAX63_015065) | - | 3024721..3025134 (-) | 414 | WP_001537782.1 | CoA-binding protein | - |
| DAX63_RS15070 (DAX63_015070) | - | 3025308..3025970 (+) | 663 | WP_000847732.1 | DUF2057 family protein | - |
| DAX63_RS15075 (DAX63_015075) | mgsA | 3026065..3026523 (+) | 459 | WP_000424187.1 | methylglyoxal synthase | - |
| DAX63_RS15080 (DAX63_015080) | helD | 3026559..3028613 (-) | 2055 | WP_000420498.1 | DNA helicase IV | - |
| DAX63_RS15085 (DAX63_015085) | - | 3028737..3029183 (+) | 447 | WP_001261224.1 | YccF domain-containing protein | - |
| DAX63_RS15090 (DAX63_015090) | yccS | 3029202..3031355 (+) | 2154 | WP_023240711.1 | YccS family putative transporter | - |
| DAX63_RS15095 (DAX63_015095) | sxy/tfoX | 3031342..3031947 (-) | 606 | WP_001202375.1 | TfoX/Sxy family DNA transformation protein | Regulator |
| DAX63_RS15100 (DAX63_015100) | sulA | 3032164..3032673 (+) | 510 | WP_000288732.1 | SOS-induced cell division inhibitor SulA | - |
| DAX63_RS15105 (DAX63_015105) | ompA | 3033030..3034085 (+) | 1056 | WP_023239146.1 | porin OmpA | - |
| DAX63_RS15110 (DAX63_015110) | matP | 3034157..3034609 (-) | 453 | WP_000877172.1 | macrodomain Ter protein MatP | - |
| DAX63_RS15115 (DAX63_015115) | - | 3034795..3036555 (+) | 1761 | WP_000156454.1 | Lon protease family protein | - |
| DAX63_RS15120 (DAX63_015120) | fabA | 3036624..3037142 (+) | 519 | WP_000227928.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| DAX63_RS15125 (DAX63_015125) | rmf | 3037243..3037410 (-) | 168 | WP_001537784.1 | ribosome modulation factor | - |
| DAX63_RS15130 (DAX63_015130) | pqiC | 3037666..3038229 (-) | 564 | WP_000759136.1 | membrane integrity-associated transporter subunit PqiC | - |
| DAX63_RS15135 (DAX63_015135) | pqiB | 3038226..3039866 (-) | 1641 | WP_000433414.1 | intermembrane transport protein PqiB | - |
| DAX63_RS15140 (DAX63_015140) | pqiA | 3039871..3041124 (-) | 1254 | WP_023239145.1 | membrane integrity-associated transporter subunit PqiA | - |
| DAX63_RS15145 (DAX63_015145) | - | 3041139..3043046 (-) | 1908 | WP_000053044.1 | ABC transporter ATP-binding protein | - |
| DAX63_RS15150 (DAX63_015150) | rlmKL | 3043059..3045167 (-) | 2109 | WP_001086481.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| DAX63_RS15155 (DAX63_015155) | - | 3045266..3046375 (+) | 1110 | WP_000224079.1 | YcbX family protein | - |
| DAX63_RS15160 (DAX63_015160) | zapC | 3046372..3046914 (-) | 543 | WP_001220671.1 | cell division protein ZapC | - |
| DAX63_RS15165 (DAX63_015165) | pyrD | 3047080..3048090 (-) | 1011 | WP_000291723.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| DAX63_RS15170 (DAX63_015170) | pepN | 3048298..3050910 (-) | 2613 | WP_000193771.1 | aminopeptidase N | - |
| DAX63_RS15175 (DAX63_015175) | pncB | 3051177..3052379 (+) | 1203 | WP_000191400.1 | nicotinate phosphoribosyltransferase | - |
| DAX63_RS15180 (DAX63_015180) | - | 3052457..3053893 (-) | 1437 | WP_023239144.1 | sodium:alanine symporter family protein | - |
| DAX63_RS15185 (DAX63_015185) | dpaL | 3054139..3055353 (-) | 1215 | WP_000544852.1 | diaminopropionate ammonia-lyase | - |
| DAX63_RS15190 (DAX63_015190) | - | 3055670..3056131 (+) | 462 | WP_000762343.1 | Lrp/AsnC family transcriptional regulator | - |
| DAX63_RS15195 (DAX63_015195) | asnS | 3056332..3057732 (+) | 1401 | WP_000117867.1 | asparagine--tRNA ligase | - |
| DAX63_RS15200 (DAX63_015200) | ompF | 3058338..3059429 (+) | 1092 | WP_000977709.1 | porin OmpF | - |
| DAX63_RS15205 (DAX63_015205) | aspC | 3059614..3060804 (+) | 1191 | WP_000462653.1 | aspartate transaminase | - |
| DAX63_RS15210 (DAX63_015210) | - | 3060920..3062175 (+) | 1256 | WP_108429787.1 | IS3-like element ISSen1 family transposase | - |
| DAX63_RS15215 (DAX63_015215) | - | 3062181..3062828 (-) | 648 | WP_001109471.1 | MBL fold metallo-hydrolase | - |
| DAX63_RS15220 (DAX63_015220) | - | 3062856..3063404 (-) | 549 | WP_000357052.1 | YcbK family protein | - |
| DAX63_RS15225 (DAX63_015225) | ldtD | 3063664..3065514 (-) | 1851 | WP_000925869.1 | L,D-transpeptidase | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23174.94 Da Isoelectric Point: 8.7403
>NTDB_id=582490 DAX63_RS15095 WP_001202375.1 3031342..3031947(-) (sxy/tfoX) [Salmonella enterica subsp. enterica strain CFSAN058606]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
Nucleotide
Download Length: 606 bp
>NTDB_id=582490 DAX63_RS15095 WP_001202375.1 3031342..3031947(-) (sxy/tfoX) [Salmonella enterica subsp. enterica strain CFSAN058606]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTACGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTACGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
75.879 |
99.005 |
0.751 |