Detailed information NTG0582465

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MU416_RS21230
• Genome accession: NZ_CP095125
• Coordinates: 4412655..4413680 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Iso00270
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4407655..4418680

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MU416_RS21210	metJ	4408716..4409033 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MU416_RS21215	yiiX	4409217..4409825 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
MU416_RS21220	rpmE	4409886..4410098 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MU416_RS21225	priA	4410301..4412499 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
MU416_RS21230	cytR	4412655..4413680 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MU416_RS21235	ftsN	4413772..4414731 (+)	960	WP_000068828.1	cell division protein FtsN	-
MU416_RS21240	hslV	4414824..4415354 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MU416_RS21245	hslU	4415364..4416695 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
MU416_RS21250	menA	4416762..4417688 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MU416_RS21255	rraA	4417781..4418266 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MU416_RS21260	zapB	4418351..4418596 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=582465 MU416_RS21230 WP_000644904.1 4412655..4413680(+) (cytR) [Escherichia coli strain Iso00270]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=582465 MU416_RS21230 WP_000644904.1 4412655..4413680(+) (cytR) [Escherichia coli strain Iso00270]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628