Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   MUA78_RS05720 Genome accession   NZ_CP095116
Coordinates   1121972..1123246 (-) Length   424 a.a.
NCBI ID   WP_250406191.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6156     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1116972..1128246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA78_RS05705 (MUA78_05700) - 1119258..1119350 (+) 93 WP_031761401.1 hypothetical protein -
  MUA78_RS05710 (MUA78_05705) - 1119330..1120235 (-) 906 WP_000184373.1 transglycosylase domain-containing protein -
  MUA78_RS05715 (MUA78_05710) tyrS 1120616..1121878 (+) 1263 WP_262515437.1 tyrosine--tRNA ligase -
  MUA78_RS05720 (MUA78_05715) htrA 1121972..1123246 (-) 1275 WP_250406191.1 S1C family serine protease Regulator
  MUA78_RS05725 (MUA78_05720) - 1123418..1124035 (+) 618 WP_000287593.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  MUA78_RS05730 (MUA78_05725) nagE 1124163..1125629 (+) 1467 WP_000276349.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  MUA78_RS05735 (MUA78_05730) - 1125736..1126866 (+) 1131 WP_000721719.1 HAD family hydrolase -
  MUA78_RS05740 (MUA78_05735) - 1126827..1126922 (-) 96 WP_031901344.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45737.86 Da        Isoelectric Point: 9.8964

>NTDB_id=582330 MUA78_RS05720 WP_250406191.1 1121972..1123246(-) (htrA) [Staphylococcus aureus strain IVB6156]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINTGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDSEDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=582330 MUA78_RS05720 WP_250406191.1 1121972..1123246(-) (htrA) [Staphylococcus aureus strain IVB6156]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATCATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTGCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTAATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCCGGAGTAGGTTCAGGTGTCATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAACTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAGGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACTAAAGGCATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGTGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGTGAACGTACTATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACACAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATTGGGTTTGCCATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGCGAAGACGGTATTTATGTCGCAAAAGCTGATAGTGATATTGACCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAGCCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGACAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.557

94.811

0.366