Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   VB13_RS08210 Genome accession   NZ_CP077685
Coordinates   1679339..1680052 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain M49 591     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1674339..1685052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VB13_RS08200 (VB13_08440) treC 1675409..1677037 (-) 1629 WP_009880613.1 alpha,alpha-phosphotrehalase -
  VB13_RS08205 (VB13_08445) treP 1677104..1679128 (-) 2025 WP_136040338.1 PTS system trehalose-specific EIIBC component -
  VB13_RS08210 (VB13_08450) treR 1679339..1680052 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  VB13_RS08215 (VB13_08460) - 1680331..1680668 (-) 338 Protein_1569 winged helix-turn-helix transcriptional regulator -
  VB13_RS08220 (VB13_08465) - 1680855..1681712 (+) 858 WP_009881025.1 VOC family protein -
  VB13_RS08225 (VB13_08470) yaaA 1681754..1682485 (+) 732 WP_012561068.1 peroxide stress protein YaaA -
  VB13_RS08230 (VB13_08475) nrdG 1682659..1683273 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  VB13_RS08235 (VB13_08480) - 1683273..1683782 (-) 510 WP_011018311.1 GNAT family N-acetyltransferase -
  VB13_RS08240 (VB13_08485) - 1683791..1684726 (-) 936 WP_009880789.1 Gfo/Idh/MocA family protein -
  VB13_RS08245 (VB13_08490) - 1684755..1684901 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=582257 VB13_RS08210 WP_002982243.1 1679339..1680052(+) (treR) [Streptococcus pyogenes strain M49 591]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=582257 VB13_RS08210 WP_002982243.1 1679339..1680052(+) (treR) [Streptococcus pyogenes strain M49 591]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679