Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   VB13_RS06675 Genome accession   NZ_CP077685
Coordinates   1344207..1344932 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain M49 591     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1339207..1349932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VB13_RS06640 (VB13_06855) rnpM 1339241..1339537 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  VB13_RS06645 (VB13_06860) nusA 1339553..1340710 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  VB13_RS06650 (VB13_06865) rimP 1340885..1341421 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  VB13_RS06660 (VB13_06875) trmB 1341680..1342315 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  VB13_RS06665 (VB13_06880) ccrZ 1342315..1343106 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  VB13_RS06670 (VB13_06885) - 1343170..1344204 (-) 1035 WP_012560891.1 ABC transporter permease -
  VB13_RS06675 (VB13_06890) pptA 1344207..1344932 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  VB13_RS06680 (VB13_06895) - 1345004..1345423 (+) 420 WP_002983376.1 HIT family protein -
  VB13_RS06685 (VB13_06900) - 1345420..1345776 (+) 357 WP_009880754.1 hypothetical protein -
  VB13_RS06690 (VB13_06905) - 1345887..1347170 (-) 1284 WP_002983372.1 LCP family protein -
  VB13_RS06695 (VB13_06910) - 1347179..1347703 (-) 525 WP_009880752.1 GNAT family N-acetyltransferase -
  VB13_RS06700 (VB13_06915) tsaE 1347678..1348139 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  VB13_RS06705 (VB13_06920) - 1348293..1349753 (-) 1461 WP_012560892.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=582251 VB13_RS06675 WP_002983379.1 1344207..1344932(-) (pptA) [Streptococcus pyogenes strain M49 591]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=582251 VB13_RS06675 WP_002983379.1 1344207..1344932(-) (pptA) [Streptococcus pyogenes strain M49 591]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGCACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714