Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KTJ81_RS09110 Genome accession   NZ_CP077680
Coordinates   1954132..1954737 (+) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica subsp. enterica serovar Kentucky strain YZ20MCS16     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1949132..1959737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTJ81_RS09090 - 1949527..1951287 (-) 1761 WP_000156448.1 Lon protease family protein -
  KTJ81_RS09095 matP 1951473..1951925 (+) 453 WP_000877172.1 macrodomain Ter protein MatP -
  KTJ81_RS09100 ompA 1951997..1953049 (-) 1053 WP_001670727.1 porin OmpA -
  KTJ81_RS09105 sulA 1953406..1953915 (-) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  KTJ81_RS09110 sxy/tfoX 1954132..1954737 (+) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  KTJ81_RS09115 yccS 1954724..1956877 (-) 2154 WP_000950881.1 YccS family putative transporter -
  KTJ81_RS09120 - 1956896..1957342 (-) 447 WP_001261222.1 YccF domain-containing protein -
  KTJ81_RS09125 helD 1957466..1959520 (+) 2055 WP_023228225.1 DNA helicase IV -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=582171 KTJ81_RS09110 WP_001202375.1 1954132..1954737(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Kentucky strain YZ20MCS16]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=582171 KTJ81_RS09110 WP_001202375.1 1954132..1954737(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Kentucky strain YZ20MCS16]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751