Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   KTT68_RS05575 Genome accession   NZ_CP077672
Coordinates   1088370..1089323 (+) Length   317 a.a.
NCBI ID   WP_007610578.1    Uniprot ID   -
Organism   Bacillus velezensis strain SWUJ1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1083370..1094323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTT68_RS05550 argF 1085189..1086160 (+) 972 WP_224224175.1 ornithine carbamoyltransferase -
  KTT68_RS05555 - 1086236..1086415 (+) 180 WP_003155070.1 YjzC family protein -
  KTT68_RS05560 - 1086452..1086637 (-) 186 WP_003155069.1 YjzD family protein -
  KTT68_RS05565 - 1086897..1087631 (+) 735 WP_007610576.1 hypothetical protein -
  KTT68_RS05570 - 1087714..1088280 (+) 567 WP_224224176.1 hypothetical protein -
  KTT68_RS05575 med 1088370..1089323 (+) 954 WP_007610578.1 BMP family ABC transporter substrate-binding protein Regulator
  KTT68_RS05580 comZ 1089336..1089527 (+) 192 WP_003155061.1 ComZ family protein Regulator
  KTT68_RS05585 - 1089556..1089774 (-) 219 WP_007409123.1 hypothetical protein -
  KTT68_RS05590 - 1089942..1090880 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  KTT68_RS05595 fabF 1090903..1092141 (+) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  KTT68_RS05600 - 1092224..1093009 (+) 786 WP_029325951.1 DUF2268 domain-containing protein -
  KTT68_RS05605 - 1093183..1094169 (+) 987 WP_039062887.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35357.02 Da        Isoelectric Point: 4.6686

>NTDB_id=582060 KTT68_RS05575 WP_007610578.1 1088370..1089323(+) (med) [Bacillus velezensis strain SWUJ1]
MITRLVMIFSLLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=582060 KTT68_RS05575 WP_007610578.1 1088370..1089323(+) (med) [Bacillus velezensis strain SWUJ1]
TTGATCACCAGGCTTGTCATGATCTTTTCTCTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGTGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTAGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAACCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAAAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.233

100

0.782