Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KQQ05_RS15155 Genome accession   NZ_CP077661
Coordinates   3134047..3134673 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter cloacae complex sp. ECL112     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3129047..3139673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KQQ05_RS15135 - 3129446..3131206 (-) 1761 WP_032608967.1 Lon protease family protein -
  KQQ05_RS15140 matP 3131393..3131845 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  KQQ05_RS15145 ompA 3131911..3132963 (-) 1053 WP_017694761.1 porin OmpA -
  KQQ05_RS15150 sulA 3133320..3133829 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  KQQ05_RS15155 sxy/tfoX 3134047..3134673 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  KQQ05_RS15160 yccS 3134630..3136792 (-) 2163 WP_032608968.1 YccS family putative transporter -
  KQQ05_RS15165 - 3136811..3137257 (-) 447 WP_003858149.1 YccF domain-containing protein -
  KQQ05_RS15170 helD 3137380..3139434 (+) 2055 WP_032608969.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=581990 KQQ05_RS15155 WP_023315767.1 3134047..3134673(+) (sxy/tfoX) [Enterobacter cloacae complex sp. ECL112]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=581990 KQQ05_RS15155 WP_023315767.1 3134047..3134673(+) (sxy/tfoX) [Enterobacter cloacae complex sp. ECL112]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572