Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KTH07_RS05355 Genome accession   NZ_CP077659
Coordinates   1152964..1153590 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter cloacae complex sp. ECL72     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1147964..1158590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTH07_RS05335 - 1148363..1150123 (-) 1761 WP_017384808.1 Lon protease family protein -
  KTH07_RS05340 matP 1150310..1150762 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  KTH07_RS05345 ompA 1150828..1151880 (-) 1053 WP_017384806.1 porin OmpA -
  KTH07_RS05350 sulA 1152237..1152746 (-) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  KTH07_RS05355 sxy/tfoX 1152964..1153590 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  KTH07_RS05360 yccS 1153547..1155709 (-) 2163 WP_015570895.1 YccS family putative transporter -
  KTH07_RS05365 - 1155728..1156174 (-) 447 WP_003858149.1 YccF domain-containing protein -
  KTH07_RS05370 helD 1156297..1158351 (+) 2055 WP_032619959.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=581952 KTH07_RS05355 WP_017384804.1 1152964..1153590(+) (sxy/tfoX) [Enterobacter cloacae complex sp. ECL72]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=581952 KTH07_RS05355 WP_017384804.1 1152964..1153590(+) (sxy/tfoX) [Enterobacter cloacae complex sp. ECL72]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572