Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   MP619_RS10995 Genome accession   NZ_CP095081
Coordinates   2217951..2218664 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain WJ001     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2212951..2223664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP619_RS10985 (MP619_10955) treC 2214034..2215662 (-) 1629 WP_129556351.1 alpha,alpha-phosphotrehalase -
  MP619_RS10990 (MP619_10960) treP 2215729..2217741 (-) 2013 WP_129556352.1 PTS system trehalose-specific EIIBC component -
  MP619_RS10995 (MP619_10965) treR 2217951..2218664 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  MP619_RS11000 (MP619_10970) - 2218952..2219974 (+) 1023 WP_129555386.1 IS30 family transposase -
  MP619_RS11005 (MP619_10975) - 2220122..2220460 (-) 339 WP_111717749.1 helix-turn-helix domain-containing protein -
  MP619_RS11010 (MP619_10980) - 2220646..2221500 (+) 855 WP_129556354.1 VOC family protein -
  MP619_RS11015 (MP619_10985) yaaA 2221542..2222273 (+) 732 WP_129556355.1 peroxide stress protein YaaA -
  MP619_RS11020 (MP619_10990) nrdG 2222445..2223059 (-) 615 WP_129556356.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  MP619_RS11025 (MP619_10995) - 2223063..2223566 (-) 504 WP_268227777.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=581882 MP619_RS10995 WP_002982243.1 2217951..2218664(+) (treR) [Streptococcus dysgalactiae strain WJ001]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=581882 MP619_RS10995 WP_002982243.1 2217951..2218664(+) (treR) [Streptococcus dysgalactiae strain WJ001]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATCAACAAAGATTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGTTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTATCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATCTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
CAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679