Detailed information    

insolico Bioinformatically predicted

Overview


Name   xerS   Type   Machinery gene
Locus tag   MP619_RS05990 Genome accession   NZ_CP095081
Coordinates   1156598..1157668 (-) Length   356 a.a.
NCBI ID   WP_012766932.1    Uniprot ID   A0A9X9GBX6
Organism   Streptococcus dysgalactiae strain WJ001     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1151598..1162668
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP619_RS05965 (MP619_05940) - 1152352..1153350 (+) 999 WP_129555738.1 polyprenyl synthetase family protein -
  MP619_RS05970 (MP619_05945) - 1153441..1153947 (+) 507 WP_111717925.1 FMN-binding protein -
  MP619_RS05975 (MP619_05950) - 1154018..1155070 (+) 1053 WP_129555739.1 FAD:protein FMN transferase -
  MP619_RS05980 (MP619_05955) - 1155060..1156010 (+) 951 WP_129555740.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -
  MP619_RS05985 (MP619_05960) - 1156081..1156521 (-) 441 WP_129555741.1 NusG domain II-containing protein -
  MP619_RS05990 (MP619_05965) xerS 1156598..1157668 (-) 1071 WP_012766932.1 tyrosine recombinase XerS Machinery gene
  MP619_RS05995 (MP619_05970) - 1158310..1159554 (+) 1245 WP_268227884.1 peptidoglycan bridge formation glycyltransferase FemA/FemB family protein -
  MP619_RS06000 (MP619_05975) - 1159584..1160006 (-) 423 WP_003058336.1 cupin domain-containing protein -
  MP619_RS06005 (MP619_05980) - 1160131..1161201 (-) 1071 WP_129555743.1 HAMP domain-containing sensor histidine kinase -
  MP619_RS06010 (MP619_05985) - 1161185..1161877 (-) 693 WP_129555744.1 response regulator transcription factor -
  MP619_RS06015 (MP619_05990) - 1161956..1162636 (-) 681 WP_129555745.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 41385.62 Da        Isoelectric Point: 9.5512

>NTDB_id=581841 MP619_RS05990 WP_012766932.1 1156598..1157668(-) (xerS) [Streptococcus dysgalactiae strain WJ001]
MRRDLLLEKIETYKAIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTDATVIADIDLATLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETMGFLEYVDKDYELKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMVIEVIRKGGKRDS
VNVAGFAKPYLEAYLAIRKNRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=581841 MP619_RS05990 WP_012766932.1 1156598..1157668(-) (xerS) [Streptococcus dysgalactiae strain WJ001]
ATGAGACGTGATTTATTACTCGAAAAAATTGAAACTTATAAAGCTATCATGCCTTGGTATGTGTTAGAATACTATCAGTC
AAAATTGGCCGTCCCATACAGTTTTACAACGCTATATGAGTATTTAAAAGAATACAAACGTTTTTTTGACTGGTTAATGG
ATGCTGACTTAACGGATGCGACTGTCATTGCTGATATCGATTTAGCGACTCTTGAACACCTGACTAAGAAAGATTTAGAG
GCCTTTGTTCTGTACTTAAGAGAACGCCCTTCTCTTAATACTTATTCCACCAAAGAGGGTCTTTCTCAAACAACGATTAA
TCGCACTTTGTCTGCTTTATCAAGCCTTTATAAATATTTGACTGAAGAGGTTGAAAATGATCAGGGAGAGCCTTATTTCT
ATCGGAATGTCATGAAGAAGGTATCCACGAAGAAGAAAAAAGAAACCCTAGCTTCTAGAGCTGAAAACATTAAACAAAAG
CTTTTTTTAGGGGATGAAACCATGGGTTTTCTAGAGTATGTAGATAAGGACTATGAACTCAAATTATCCAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAAGAGAGAGATCTAGCTATTATTGCCCTACTACTGGCCTCAGGCGTTCGTCTATCAGAAG
CCGTTAATCTTGATTTAAAAGATGTTAATCTTAATATGATGGTTATCGAGGTTATCCGCAAAGGGGGAAAACGAGATTCA
GTGAATGTTGCAGGTTTTGCTAAACCTTATTTAGAAGCTTATCTGGCTATTCGCAAGAATCGTTATAAGGCTGAAAAACA
AGACCTTGCCTTCTTTTTAACGGAATATCGAGGGGTACCCAATCGGATGGATGCCTCCAGTATTGAAAAAATGGTTGGTA
AATACTCTCAAGATTTTAAAATTCGTGTGACTCCTCATAAGTTACGACACACATTAGCCACACGTCTTTATGATGCGACC
AAGTCCCAGGTTTTGGTCAGTCATCAATTGGGGCATGCATCGACTCAAGTTACCGATTTGTATACCCATATTGTTAACGA
TGAACAAAAAAACGCCTTAGACAAATTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9X9GBX6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

80.618

100

0.806