Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   MUK52_RS21545 Genome accession   NZ_CP095011
Coordinates   4884147..4885880 (-) Length   577 a.a.
NCBI ID   WP_114057465.1    Uniprot ID   A0A344U5W9
Organism   Streptomyces sp. 2P-4     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4879147..4890880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUK52_RS21535 - 4881006..4882169 (+) 1164 WP_246042682.1 RNA polymerase sigma factor -
  MUK52_RS21540 rcrQ 4882228..4884150 (-) 1923 WP_114057466.1 ABC transporter ATP-binding protein Regulator
  MUK52_RS21545 rcrP 4884147..4885880 (-) 1734 WP_114057465.1 ABC transporter ATP-binding protein Regulator
  MUK52_RS21550 - 4886015..4887469 (-) 1455 WP_114057464.1 FGGY family carbohydrate kinase -
  MUK52_RS21555 - 4887545..4887844 (-) 300 WP_114057463.1 YtxH domain-containing protein -
  MUK52_RS21575 - 4889252..4890088 (+) 837 WP_114057462.1 DUF4397 domain-containing protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62305.30 Da        Isoelectric Point: 6.1018

>NTDB_id=581776 MUK52_RS21545 WP_114057465.1 4884147..4885880(-) (rcrP) [Streptomyces sp. 2P-4]
MLIRLLRTHLGPYRKPIALLVLLQLLQTSASLYLPTLNADIIDKGVVTGDTGYILRFGALMLAVSLVQLGCNIGAVYYGA
RTSAALGRDVRAAVFDRVQSFSARELGQFGAPSLITRTTNDVQQIQMLVLMTFTLMVSAPIMCIGGIAMALSLDVALSGV
LLAVVPVLGLSVGAIVWRTRPLFRQMQERLDAVNRVLREQITGNRVIRAFVRDGYEKERFRGANTSLTDVSLASGRLLAL
MFPTVLVVVNISSVAVIWFGAMRIDSGGLEIGQLTAFLAYLMQIVMAVMMATFMFMMVPRAEVCAERVQEVLDTESSVAP
PANPVRELSRHGVLELRGADFRYPGAEAPVLRGVDLVARPGETTAVIGSTGSGKSTLLGLVPRLFDATGGEVLVDGEDVR
RLDPKLLARTVGLVPQKPYLFSGTVASNLRYGRPDATDEELWHALEVAQAREFVAALEGGLDAPVTQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALGRETGDATVVIVAQRVATIRDADRIIVLDEGQVVGEGRHHELMAGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=581776 MUK52_RS21545 WP_114057465.1 4884147..4885880(-) (rcrP) [Streptomyces sp. 2P-4]
GTGCTCATACGACTTCTGCGGACCCACCTGGGTCCGTACCGGAAACCGATCGCCCTGCTGGTGCTGCTGCAACTGCTGCA
GACCAGCGCGAGCCTCTACCTGCCCACCCTCAACGCCGACATCATCGACAAGGGCGTCGTGACCGGCGACACCGGCTACA
TCCTGCGCTTCGGTGCGCTGATGCTGGCCGTCTCGCTCGTCCAGCTGGGCTGCAACATCGGCGCCGTGTACTACGGCGCC
CGCACCTCCGCGGCGCTGGGCCGCGACGTCCGCGCCGCCGTCTTCGACCGGGTGCAGAGCTTCTCCGCGCGCGAGCTGGG
CCAGTTCGGCGCGCCGTCACTGATCACCCGTACGACGAACGACGTGCAGCAGATCCAGATGCTGGTGCTGATGACCTTCA
CGCTGATGGTCTCGGCGCCGATCATGTGCATCGGCGGCATCGCGATGGCCCTGTCGCTGGACGTGGCGCTGTCGGGCGTG
CTGCTGGCCGTGGTGCCGGTCCTGGGCCTGTCCGTCGGCGCGATCGTGTGGCGGACGCGCCCGCTGTTCCGCCAGATGCA
GGAGCGGCTGGACGCGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGGGTGATCCGCGCGTTCGTCCGCGACG
GCTACGAGAAGGAACGCTTCCGCGGGGCGAACACCTCGCTGACCGACGTGTCGCTGGCCTCGGGGCGGCTCCTGGCGCTG
ATGTTCCCCACCGTCCTCGTGGTCGTGAACATCTCCAGCGTCGCCGTCATCTGGTTCGGCGCGATGCGCATCGACAGCGG
CGGCTTGGAGATCGGCCAGCTGACGGCGTTCCTCGCCTACCTGATGCAGATCGTCATGGCCGTCATGATGGCCACGTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGCGCGGAGCGCGTGCAGGAGGTGCTGGACACCGAGTCCAGCGTCGCCCCG
CCCGCAAACCCGGTGCGCGAGCTGTCCCGGCACGGTGTGCTGGAACTGCGCGGCGCCGACTTCCGCTACCCGGGCGCGGA
GGCGCCCGTGCTGCGCGGGGTGGACCTGGTGGCCCGCCCCGGGGAGACGACGGCGGTCATCGGCTCGACCGGCAGCGGCA
AGTCGACGCTGCTGGGGCTGGTGCCGCGGCTGTTCGACGCGACCGGCGGCGAGGTCCTCGTCGACGGCGAGGACGTGCGC
CGCCTCGACCCGAAGCTGCTGGCCCGCACGGTGGGCCTGGTGCCCCAGAAGCCGTACCTGTTCTCCGGAACGGTGGCCTC
GAACCTGCGCTACGGGCGCCCGGACGCCACCGACGAGGAGCTGTGGCATGCCCTGGAGGTGGCGCAGGCGCGGGAGTTCG
TCGCCGCGCTCGAAGGCGGCCTGGATGCACCGGTCACCCAGGGCGGGACGAACGTCTCCGGTGGCCAGCGCCAGCGCCTG
GCCATCGCCCGCACGCTGGTGCAGCGCCCGGAGATCTACCTGTTCGACGACTCCTTCTCGGCCCTGGACTACGCGACGGA
CGCGGCGCTGCGCGCGGCGCTGGGCCGGGAGACCGGGGACGCGACGGTGGTCATCGTCGCGCAGCGGGTCGCGACGATCC
GCGACGCCGACCGGATCATCGTGCTCGACGAGGGGCAGGTCGTCGGCGAGGGCCGCCACCACGAGCTGATGGCGGGGAAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTGACGGAGGCGGAGGCCGCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(352-498)

ABC transporter transmembrane region (ABC_membrane)

(19-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A344U5W9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.254

97.574

0.383