Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   MUK52_RS21540 Genome accession   NZ_CP095011
Coordinates   4882228..4884150 (-) Length   640 a.a.
NCBI ID   WP_114057466.1    Uniprot ID   A0A344U5X0
Organism   Streptomyces sp. 2P-4     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4877228..4889150
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUK52_RS21525 - 4877916..4878530 (+) 615 WP_246042885.1 ElyC/SanA/YdcF family protein -
  MUK52_RS21530 - 4878768..4880846 (+) 2079 WP_114057467.1 molybdopterin oxidoreductase family protein -
  MUK52_RS21535 - 4881006..4882169 (+) 1164 WP_246042682.1 RNA polymerase sigma factor -
  MUK52_RS21540 rcrQ 4882228..4884150 (-) 1923 WP_114057466.1 ABC transporter ATP-binding protein Regulator
  MUK52_RS21545 rcrP 4884147..4885880 (-) 1734 WP_114057465.1 ABC transporter ATP-binding protein Regulator
  MUK52_RS21550 - 4886015..4887469 (-) 1455 WP_114057464.1 FGGY family carbohydrate kinase -
  MUK52_RS21555 - 4887545..4887844 (-) 300 WP_114057463.1 YtxH domain-containing protein -

Sequence

Protein


Download         Length: 640 a.a.        Molecular weight: 68902.27 Da        Isoelectric Point: 5.0454

>NTDB_id=581775 MUK52_RS21540 WP_114057466.1 4882228..4884150(-) (rcrQ) [Streptomyces sp. 2P-4]
MSGPGGRMMTGPGQRSLDFKGSGKRLLRQIAYDRVKLWGMVAAVFGSVVCTVIGPKILGHATDLVFGGIVGREMPAGLTK
EQALDAMRARGEDGTADMLSGTDFTPGEGIDFGAVGVVAVWALVVFVLAGLLMLVATRLSNHIMNGTVYRMREELQDKLS
RLPLSYFDRQKRGEVLSRATNDIDNIGQTLQQTMGQLLNSLLTIVGVLAMMVWISPLLALVALVTIPVSVVVAARIGKKS
QPQFVAQWKSTGSLNAHVEEMYSGHALVKVFGRQEESAAVFAEQNEALFRASFKAQLVSGIMQPVMFFISNINYVLVAVV
GGLRVASGSLSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERVYEVLDAEEQEPDVAVPERPQEVRGRVVLEKV
SFRYEPDRPLIEDLSLAVEPGQTVAIVGPTGAGKTTLVNLLMRFYEVTGGRIALDGADIAKMAREDLRGAIGMVLQDTWL
FGGTIAENIAYGASREVTRAEIEEAARAAHADRFVRTLPDGYDTVLDDEGSGVSAGEKQLITIARAFLSDPVILVLDEAT
SSVDTRTEVLIQKAMARLAHGRTSFVIAHRLSTIRDADVILVMENGSIVEQGAHEDLLAADGAYARLYAAQFAQAVAEVD

Nucleotide


Download         Length: 1923 bp        

>NTDB_id=581775 MUK52_RS21540 WP_114057466.1 4882228..4884150(-) (rcrQ) [Streptomyces sp. 2P-4]
ATGAGCGGGCCCGGAGGACGGATGATGACGGGGCCCGGGCAGCGGTCCCTGGACTTCAAGGGCTCGGGGAAGCGGCTGCT
GCGGCAGATCGCCTACGACCGGGTGAAGCTGTGGGGGATGGTCGCCGCCGTGTTCGGCAGCGTCGTCTGCACGGTGATCG
GCCCGAAGATCCTCGGGCACGCGACGGACCTCGTCTTCGGGGGGATCGTCGGCCGGGAGATGCCGGCGGGCCTCACCAAG
GAGCAGGCGCTCGACGCGATGCGCGCCCGCGGCGAGGACGGCACCGCCGACATGCTGTCGGGGACGGACTTCACGCCGGG
CGAGGGCATCGACTTCGGCGCGGTCGGCGTCGTCGCGGTGTGGGCGCTGGTGGTGTTCGTGCTGGCCGGGCTGCTGATGC
TGGTCGCGACGCGGCTGTCGAACCACATCATGAACGGCACCGTGTACCGGATGCGGGAGGAGCTGCAGGACAAGCTGTCG
CGGCTGCCGCTGTCGTACTTCGACCGGCAGAAGCGGGGCGAGGTCCTCAGCCGGGCGACGAACGACATCGACAACATCGG
GCAGACGCTCCAGCAGACGATGGGGCAGCTGCTGAACTCGCTGCTGACGATCGTCGGCGTGCTCGCGATGATGGTCTGGA
TCTCGCCGCTGCTGGCGCTGGTCGCGCTGGTGACGATCCCGGTGTCGGTGGTCGTGGCGGCGAGGATCGGCAAGAAGTCG
CAGCCGCAGTTCGTGGCCCAGTGGAAGTCGACCGGCTCGCTGAACGCGCACGTCGAGGAGATGTACTCGGGGCACGCGCT
GGTGAAGGTCTTCGGCCGGCAGGAGGAGTCCGCGGCGGTCTTCGCCGAGCAGAACGAGGCGCTGTTCCGGGCCTCGTTCA
AGGCGCAGCTGGTCAGCGGCATCATGCAGCCGGTGATGTTCTTCATCTCGAACATCAACTACGTGCTGGTGGCGGTGGTC
GGCGGTCTGCGGGTGGCCTCGGGCAGCCTGTCGATCGGCGACGTGCAGGCGTTCATCCAGTACTCGCGGCAGTTCTCGAT
GCCGCTGACGCAGGTCGCGTCGATGGCGAACCTGGTGCAGTCGGGTGTCGCGTCGGCGGAGCGCGTGTACGAGGTGCTGG
ACGCGGAGGAGCAGGAGCCGGACGTGGCGGTTCCGGAGCGTCCGCAGGAGGTCCGCGGCCGGGTCGTCCTGGAGAAGGTG
TCCTTCCGGTACGAGCCGGACAGGCCGCTGATCGAGGACCTGTCGCTGGCGGTGGAGCCGGGCCAGACGGTCGCGATCGT
CGGCCCCACCGGCGCCGGCAAGACGACGCTGGTGAACCTGCTGATGCGGTTCTACGAGGTCACCGGCGGCCGGATCGCCC
TGGACGGAGCGGACATCGCGAAGATGGCCCGCGAGGACCTGCGCGGGGCCATCGGCATGGTGCTCCAGGACACCTGGCTG
TTCGGCGGGACGATCGCGGAGAACATCGCGTACGGCGCCTCCCGGGAGGTCACGCGCGCCGAGATCGAGGAGGCCGCGCG
GGCCGCACACGCCGACCGGTTCGTGCGCACCCTGCCGGACGGCTACGACACGGTGCTGGACGACGAGGGCTCGGGCGTCA
GCGCCGGCGAGAAGCAGCTGATCACGATCGCGCGGGCGTTCCTGTCGGACCCGGTGATCCTGGTCCTCGACGAGGCGACG
AGCTCGGTCGACACCCGTACGGAGGTGCTGATCCAGAAGGCGATGGCGCGGCTGGCGCACGGCCGCACCTCGTTCGTCAT
CGCGCACCGGCTCTCCACGATCCGGGACGCTGACGTGATCCTGGTGATGGAGAACGGCTCGATCGTCGAGCAGGGCGCGC
ACGAGGACCTGCTCGCGGCGGACGGCGCCTACGCGCGGCTGTACGCAGCGCAGTTCGCCCAGGCGGTGGCCGAAGTCGAC
TAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(53-349)

ABC transporter (ABC_tran)

(412-561)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A344U5X0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

40.61

97.344

0.395