Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   KTN74_RS06550 Genome accession   NZ_CP077633
Coordinates   1275027..1275995 (+) Length   322 a.a.
NCBI ID   WP_002874446.1    Uniprot ID   A0AB36G4C9
Organism   Campylobacter jejuni strain R16.2162     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1270027..1280995
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTN74_RS06525 (KTN74_06525) cdsA 1270937..1271662 (-) 726 WP_002889945.1 phosphatidate cytidylyltransferase -
  KTN74_RS06530 (KTN74_06530) - 1271671..1272009 (-) 339 WP_002852397.1 hypothetical protein -
  KTN74_RS06535 (KTN74_06535) - 1272011..1273318 (-) 1308 WP_002864240.1 NFACT family protein -
  KTN74_RS06540 (KTN74_06540) mobA 1273380..1273955 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  KTN74_RS06545 (KTN74_06545) pldA 1273952..1274941 (+) 990 WP_217315724.1 phospholipase A -
  KTN74_RS06550 (KTN74_06550) ceuB 1275027..1275995 (+) 969 WP_002874446.1 ABC transporter permease Machinery gene
  KTN74_RS06555 (KTN74_06555) ceuC 1275988..1276926 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  KTN74_RS06560 (KTN74_06560) ceuD 1276923..1277678 (+) 756 WP_002858409.1 ABC transporter ATP-binding protein -
  KTN74_RS06565 (KTN74_06565) ceuB 1277691..1278683 (+) 993 WP_002852385.1 enterochelin ABC transporter substrate-binding protein CeuB -
  KTN74_RS06575 (KTN74_06575) - 1278909..1279463 (-) 555 WP_002855904.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35455.37 Da        Isoelectric Point: 9.6678

>NTDB_id=581751 KTN74_RS06550 WP_002874446.1 1275027..1275995(+) (ceuB) [Campylobacter jejuni strain R16.2162]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=581751 KTN74_RS06550 WP_002874446.1 1275027..1275995(+) (ceuB) [Campylobacter jejuni strain R16.2162]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTTACTCAAACTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAAGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994