Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   MUK52_RS10835 Genome accession   NZ_CP095011
Coordinates   2582956..2584011 (-) Length   351 a.a.
NCBI ID   WP_114054003.1    Uniprot ID   A0A344TVY7
Organism   Streptomyces sp. 2P-4     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 2577956..2589011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUK52_RS10815 - 2578148..2579071 (-) 924 WP_114054007.1 ABC transporter permease -
  MUK52_RS10820 - 2579117..2580739 (-) 1623 WP_114054006.1 ABC transporter substrate-binding protein -
  MUK52_RS10825 - 2580848..2581786 (-) 939 WP_284575774.1 GNAT family N-acetyltransferase -
  MUK52_RS10830 - 2581917..2582963 (-) 1047 WP_114054004.1 dipeptide ABC transporter ATP-binding protein -
  MUK52_RS10835 amiE 2582956..2584011 (-) 1056 WP_114054003.1 ABC transporter ATP-binding protein Regulator
  MUK52_RS10840 - 2584025..2584993 (-) 969 WP_114054002.1 ABC transporter permease -
  MUK52_RS10845 - 2584986..2585927 (-) 942 WP_114054001.1 ABC transporter permease -
  MUK52_RS10850 - 2586026..2587648 (-) 1623 WP_284575776.1 ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 351 a.a.        Molecular weight: 38092.04 Da        Isoelectric Point: 6.8797

>NTDB_id=581749 MUK52_RS10835 WP_114054003.1 2582956..2584011(-) (amiE) [Streptomyces sp. 2P-4]
MTSNDKTTNVPAPRAASEGTPLLEVRDLHVEFHTRDGVAKAVNGVSYSVDAGETLAVLGESGSGKSVTAQAIMGILDMPP
GKIPSGEILFRGQDLLKLPADEYRKIRGSKIAMIFQDALSSLNPVHTVGAQLGEMFRVHRGMSKKDSLAKAVELMDRVKI
PAAKARVGDYPHQFSGGMRQRIMIAMAMALEPDLIIADEPTTALDVTVQAQVMDLLAELQREMNMGLILITHDLGVVADV
ADKIAVMYGGRIVETAPVHEIYKRPAHPYTRGLLDSIPRLDLKGQELYAIKGLPPNLLNIPSGCAFNPRCPKAQDVCRTD
VPVLHRVTEQDGTELPGRGSACHFWKEQIHG

Nucleotide


Download         Length: 1056 bp        

>NTDB_id=581749 MUK52_RS10835 WP_114054003.1 2582956..2584011(-) (amiE) [Streptomyces sp. 2P-4]
TTGACCAGCAACGACAAGACCACGAACGTCCCGGCGCCGCGCGCCGCGAGCGAGGGCACCCCCCTCCTCGAAGTGCGCGA
CCTGCACGTTGAGTTCCACACCCGCGACGGCGTCGCCAAGGCCGTCAACGGAGTCTCCTACTCCGTGGACGCCGGCGAGA
CCCTCGCCGTCCTCGGCGAGTCCGGCTCCGGCAAGTCCGTGACGGCGCAGGCCATCATGGGCATCCTCGACATGCCGCCC
GGCAAGATCCCCTCCGGCGAGATCCTCTTCCGGGGCCAGGACCTGCTGAAGCTCCCGGCGGACGAGTACCGCAAGATCCG
CGGCTCGAAGATCGCGATGATCTTCCAGGACGCGCTCTCCTCGCTGAACCCGGTGCACACCGTCGGCGCCCAGCTCGGGG
AGATGTTCCGCGTCCACCGCGGCATGTCGAAGAAGGACTCGCTCGCCAAGGCCGTCGAACTGATGGACCGGGTGAAGATC
CCCGCCGCCAAGGCGCGCGTGGGCGACTACCCGCACCAGTTCTCCGGCGGCATGCGCCAGCGCATCATGATCGCCATGGC
GATGGCCCTGGAGCCCGACCTGATCATCGCCGACGAGCCGACCACGGCCCTCGACGTGACGGTCCAGGCCCAGGTCATGG
ACCTCCTCGCGGAACTCCAGCGCGAGATGAACATGGGCCTGATCCTGATCACCCACGACCTCGGCGTCGTCGCCGACGTC
GCGGACAAGATCGCCGTCATGTACGGCGGCCGGATCGTCGAGACCGCCCCGGTCCACGAGATCTACAAGCGCCCCGCGCA
CCCGTACACCCGCGGCCTGCTCGACTCGATCCCGCGCCTGGACCTCAAGGGCCAGGAGCTGTACGCGATCAAGGGCCTGC
CGCCCAACCTGCTGAACATCCCCTCGGGCTGCGCCTTCAACCCGCGCTGCCCGAAGGCGCAGGACGTCTGCCGCACCGAC
GTTCCGGTCCTGCACCGGGTGACCGAGCAGGACGGCACCGAGCTGCCGGGCCGCGGCAGCGCGTGCCACTTCTGGAAGGA
GCAGATCCATGGCTGA

Domains

Predicted by InterProScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(253-317)

ABC transporter (ABC_tran)

(43-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A344TVY7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

50.676

84.33

0.427
  amiE Streptococcus thermophilus LMG 18311

50.171

83.476

0.419
  amiE Streptococcus thermophilus LMD-9

50.171

83.476

0.419
  oppD Streptococcus mutans UA159

47.403

87.749

0.416