Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   MUK52_RS10805 Genome accession   NZ_CP095011
Coordinates   2576162..2577145 (-) Length   327 a.a.
NCBI ID   WP_284575772.1    Uniprot ID   -
Organism   Streptomyces sp. 2P-4     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 2571162..2582145
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUK52_RS10785 - 2573179..2573562 (-) 384 WP_114054013.1 DUF6113 family protein -
  MUK52_RS10790 mshB 2573559..2574455 (-) 897 WP_114054012.1 N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase -
  MUK52_RS10795 - 2574494..2574688 (-) 195 WP_114054011.1 hypothetical protein -
  MUK52_RS10800 - 2575099..2576169 (-) 1071 WP_114054010.1 dipeptide ABC transporter ATP-binding protein -
  MUK52_RS10805 amiE 2576162..2577145 (-) 984 WP_284575772.1 ABC transporter ATP-binding protein Regulator
  MUK52_RS10810 - 2577160..2578155 (-) 996 WP_114054008.1 ABC transporter permease -
  MUK52_RS10815 - 2578148..2579071 (-) 924 WP_114054007.1 ABC transporter permease -
  MUK52_RS10820 - 2579117..2580739 (-) 1623 WP_114054006.1 ABC transporter substrate-binding protein -
  MUK52_RS10825 - 2580848..2581786 (-) 939 WP_284575774.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 327 a.a.        Molecular weight: 35725.48 Da        Isoelectric Point: 6.8311

>NTDB_id=581747 MUK52_RS10805 WP_284575772.1 2576162..2577145(-) (amiE) [Streptomyces sp. 2P-4]
MLLEVRDLHVEFRTRDGVAKAVNGVNYSVDEGETLAVLGESGSGKSVTAQAVMGILDVPPGRIAGGEILFQGRDLLRMKE
DERRRVRGARMAMIFQDALSALNPVLTVGAQLGEMFEVHRGMSRKDSRARAVELMDRVRIPAARQRAGDYPHQFSGGMRQ
RIMIAMALALEPSLIIADEPTTALDVTVQAQVMDLLAELQRELNMGLILITHDLGVVADVADKIAVMYAGRIVEAAPVHE
LYRAPAHPYTRGLLDSIPRLDQMGQELYAIKGLPPNLVDIPPGCAFNPRCPMAQAICRTDVPPLYPVTGTPARRTSACHF
WKECLGG

Nucleotide


Download         Length: 984 bp        

>NTDB_id=581747 MUK52_RS10805 WP_284575772.1 2576162..2577145(-) (amiE) [Streptomyces sp. 2P-4]
ATGCTGCTCGAAGTCCGCGACCTCCACGTGGAGTTCCGCACCCGCGACGGCGTCGCCAAGGCCGTCAACGGCGTGAACTA
CTCCGTCGACGAAGGGGAGACGCTCGCCGTGCTCGGCGAGTCCGGCTCCGGGAAGTCCGTGACCGCCCAGGCGGTCATGG
GCATCCTCGACGTGCCGCCCGGCCGCATCGCAGGCGGCGAGATCCTCTTCCAGGGCCGCGACCTGCTGCGGATGAAGGAG
GACGAGCGGCGCCGGGTCCGCGGCGCCAGGATGGCGATGATCTTCCAGGACGCGCTGTCCGCGCTGAACCCGGTCCTCAC
CGTGGGCGCGCAGCTCGGCGAGATGTTCGAGGTGCACCGCGGGATGTCCCGCAAGGACTCCCGGGCGCGCGCCGTGGAGC
TGATGGACCGGGTGCGGATCCCGGCGGCCCGGCAGCGCGCGGGGGACTACCCGCACCAGTTCTCCGGCGGCATGCGCCAG
CGCATCATGATCGCGATGGCCCTCGCCCTGGAGCCCTCCCTGATCATCGCGGACGAGCCGACGACCGCCCTGGACGTGAC
GGTCCAGGCCCAGGTCATGGACCTCCTCGCGGAGCTGCAGCGCGAGCTGAACATGGGCCTGATCCTGATCACCCACGACC
TCGGCGTCGTCGCCGACGTCGCGGACAAGATCGCCGTCATGTACGCGGGCCGGATCGTCGAGGCGGCACCCGTCCACGAG
CTGTACCGGGCGCCCGCGCACCCGTACACGCGCGGCCTGCTCGACTCCATCCCGCGCCTGGACCAGATGGGCCAGGAGCT
GTACGCCATCAAGGGCCTGCCGCCCAACCTCGTGGACATCCCGCCCGGCTGCGCCTTCAACCCGCGCTGCCCCATGGCCC
AGGCGATCTGCCGCACCGACGTCCCGCCGCTGTACCCGGTCACCGGTACGCCCGCGCGCCGGACGAGCGCCTGCCACTTC
TGGAAGGAGTGCCTCGGTGGCTGA

Domains

Predicted by InterProScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(233-297)

ABC transporter (ABC_tran)

(23-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

47.188

97.859

0.462
  amiE Streptococcus thermophilus LMG 18311

46.875

97.859

0.459
  amiE Streptococcus thermophilus LMD-9

46.875

97.859

0.459
  oppD Streptococcus mutans UA159

46.278

94.495

0.437