Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   MUK52_RS07830 Genome accession   NZ_CP095011
Coordinates   1888384..1889181 (+) Length   265 a.a.
NCBI ID   WP_114054504.1    Uniprot ID   A0A344TXF1
Organism   Streptomyces sp. 2P-4     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1883384..1894181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUK52_RS07815 - 1883575..1884180 (-) 606 WP_114054507.1 YdbC family protein -
  MUK52_RS07820 - 1884356..1887241 (-) 2886 WP_114054506.1 vitamin B12-dependent ribonucleotide reductase -
  MUK52_RS07825 nrdR 1887395..1887907 (-) 513 WP_114054505.1 transcriptional regulator NrdR -
  MUK52_RS07830 dinR/lexA 1888384..1889181 (+) 798 WP_114054504.1 transcriptional repressor LexA Regulator
  MUK52_RS07835 - 1889294..1891264 (-) 1971 WP_114054503.1 ATP-dependent DNA helicase -
  MUK52_RS07840 - 1891445..1892140 (-) 696 WP_114054502.1 GNAT family N-acetyltransferase -
  MUK52_RS07845 - 1892148..1894151 (-) 2004 WP_284575297.1 IucA/IucC family protein -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 28579.36 Da        Isoelectric Point: 7.4239

>NTDB_id=581734 MUK52_RS07830 WP_114054504.1 1888384..1889181(+) (dinR/lexA) [Streptomyces sp. 2P-4]
MTTTADSAAITAQNRSQSRLEPVHAMNDASASLTPEADAVRPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGY
PPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTTGKPAASYVPLVGRIAAGGPILA
EESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPH
NAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 798 bp        

>NTDB_id=581734 MUK52_RS07830 WP_114054504.1 1888384..1889181(+) (dinR/lexA) [Streptomyces sp. 2P-4]
GTGACCACCACCGCAGACAGTGCCGCCATCACTGCCCAGAACCGCTCCCAAAGCCGACTCGAGCCGGTGCATGCCATGAA
CGACGCAAGCGCAAGCCTGACCCCGGAGGCGGACGCCGTCCGCCCCGCTCGCTCCCTTCCAGGACGCCCCCCAGGCATCC
GCGCCGACAGCTCCGGGCTCACCGACCGGCAGCGCCGGGTCATCGAGGTCATCCGGGACTCCGTGCAGCGCCGGGGCTAC
CCGCCGTCCATGCGGGAGATCGGCCAGGCGGTCGGCCTGTCCAGCACCTCGTCCGTCGCCCACCAGCTCATGGCCCTGGA
GCGCAAGGGCTTCCTCCGCCGCGACCCGCACCGCCCCCGGGCGTACGAGGTGCGCGGCTCGGACCAGCCCAGCTCGCAGC
CCACGGACACCACCGGCAAGCCCGCCGCCTCGTACGTCCCCCTGGTCGGCCGGATCGCGGCCGGCGGCCCGATCCTCGCC
GAGGAGTCCGTGGAGGACGTCTTCCCGCTACCGCGGCAGCTCGTCGGTGACGGTGAGCTCTTCGTCCTCAAGGTCGTCGG
CGACTCCATGATCGAGGCCGCGATCTGCGACGGCGACTGGGTCACGGTCCGCCGCCAGCCCGTCGCCGAGAACGGCGACA
TCGTGGCCGCCATGCTCGACGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCACGTGTGGCTGCTCCCCCAC
AACGCGGCGTACCAGCCGATCCCCGGCGACGAGGCGACCATCCTCGGCAAGGTCGTCGCCGTACTGCGCCGGGTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(58-121)

Peptidase S24-like (Peptidase_S24)

(147-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A344TXF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.698

80

0.374