Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | JGX27_RS10820 | Genome accession | NZ_CP077423 |
| Coordinates | 2157424..2159865 (-) | Length | 813 a.a. |
| NCBI ID | WP_009855136.1 | Uniprot ID | - |
| Organism | Streptococcus gallolyticus subsp. gallolyticus TX20005 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2152424..2164865
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JGX27_RS10795 (JGX27_10795) | - | 2152910..2154124 (-) | 1215 | WP_009855132.1 | YcaO-like family protein | - |
| JGX27_RS10800 (JGX27_10800) | - | 2154121..2154990 (-) | 870 | WP_009855133.1 | hypothetical protein | - |
| JGX27_RS10805 (JGX27_10805) | - | 2155087..2155227 (-) | 141 | WP_012962614.1 | hypothetical protein | - |
| JGX27_RS10810 (JGX27_10810) | hslO | 2155514..2156380 (+) | 867 | WP_009855134.1 | Hsp33 family molecular chaperone HslO | - |
| JGX27_RS10815 (JGX27_10815) | dusB | 2156373..2157350 (+) | 978 | WP_009855135.1 | tRNA dihydrouridine synthase DusB | - |
| JGX27_RS10820 (JGX27_10820) | clpC | 2157424..2159865 (-) | 2442 | WP_009855136.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| JGX27_RS10825 (JGX27_10825) | - | 2159862..2160323 (-) | 462 | WP_009855137.1 | CtsR family transcriptional regulator | - |
| JGX27_RS10830 (JGX27_10830) | - | 2161034..2161498 (+) | 465 | WP_009855139.1 | small multi-drug export protein | - |
| JGX27_RS10835 (JGX27_10835) | - | 2161613..2162473 (-) | 861 | WP_009855140.1 | helix-turn-helix domain-containing protein | - |
| JGX27_RS10840 (JGX27_10840) | - | 2162515..2163711 (-) | 1197 | WP_009855141.1 | MFS transporter | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90137.51 Da Isoelectric Point: 5.7311
>NTDB_id=581531 JGX27_RS10820 WP_009855136.1 2157424..2159865(-) (clpC) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
MSEYSIKMQEVFSVAQYQAARFESPYLESWHVLLAMVAIHDSVAGLTFAEYQTKIAYEEYEAAAVLAIGKSPLTDVDRVH
FVEQSKALSDVLAFAESICQVTGGNEIGTEHMLYAMLLNLDLFATRLLEVAGFKNKEDGDAARLIDLRKSLARNAGFTKE
NIKAIHELRKPKKSTMGGAFSEMMKPQSTAGDLSDFTRDLTEMARQGKLEPVIGREKEISRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVNGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHLEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYEDFHNVVISDE
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKEAPAILTPADKAILEGDFKLATKLLKESHKKPNRKPTAVTE
DDIMATLSRLSGIPVEKMTQADSKKYLNLEKELHKRVIGQDSAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDEKTVGFGARDMAHDYEAMQKRIMEELKKAYRPEFINRIDEKVVFHN
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEIGYDPEMGARPLRRTLQDKVEDELSELILSGELASGNTLK
IGVSKGQLKFDIA
MSEYSIKMQEVFSVAQYQAARFESPYLESWHVLLAMVAIHDSVAGLTFAEYQTKIAYEEYEAAAVLAIGKSPLTDVDRVH
FVEQSKALSDVLAFAESICQVTGGNEIGTEHMLYAMLLNLDLFATRLLEVAGFKNKEDGDAARLIDLRKSLARNAGFTKE
NIKAIHELRKPKKSTMGGAFSEMMKPQSTAGDLSDFTRDLTEMARQGKLEPVIGREKEISRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVNGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHLEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYEDFHNVVISDE
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKEAPAILTPADKAILEGDFKLATKLLKESHKKPNRKPTAVTE
DDIMATLSRLSGIPVEKMTQADSKKYLNLEKELHKRVIGQDSAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDEKTVGFGARDMAHDYEAMQKRIMEELKKAYRPEFINRIDEKVVFHN
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEIGYDPEMGARPLRRTLQDKVEDELSELILSGELASGNTLK
IGVSKGQLKFDIA
Nucleotide
Download Length: 2442 bp
>NTDB_id=581531 JGX27_RS10820 WP_009855136.1 2157424..2159865(-) (clpC) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
ATGAGTGAGTATTCGATAAAAATGCAAGAGGTTTTCAGTGTTGCTCAATACCAAGCAGCGCGTTTTGAAAGCCCATATTT
AGAAAGTTGGCACGTCCTTTTAGCCATGGTTGCTATCCATGACTCAGTCGCAGGGCTAACATTTGCGGAATACCAAACTA
AAATCGCCTATGAAGAATATGAAGCGGCAGCTGTTTTAGCCATTGGGAAATCACCGTTAACGGATGTTGACAGAGTTCAT
TTTGTAGAGCAATCTAAAGCTCTTAGTGATGTTTTAGCATTTGCTGAGTCTATTTGTCAGGTGACTGGTGGTAACGAAAT
CGGGACAGAACACATGCTTTATGCGATGTTGTTAAACCTTGATTTATTTGCCACACGTTTGTTAGAAGTTGCTGGTTTTA
AAAACAAAGAAGACGGTGACGCTGCTCGTTTGATTGATTTGCGTAAGAGTTTGGCACGTAATGCTGGTTTTACAAAGGAA
AATATCAAAGCTATTCATGAACTTCGTAAGCCGAAAAAATCGACAATGGGCGGTGCTTTTTCTGAAATGATGAAACCACA
GTCAACAGCGGGGGATTTGTCAGATTTCACGCGTGATTTGACAGAGATGGCACGTCAAGGAAAATTAGAACCTGTTATCG
GTCGTGAAAAAGAAATTTCTCGTATGGTGCAGGTGCTTAGTCGCAAAACGAAAAACAATCCAGTTTTAGTAGGGGAAGCT
GGTGTTGGTAAAACGGCTCTTGCTTACGGTTTGGCACAGCGAATTGTCAATGGTGCGATTCCGTATGAACTCCAAGACAT
GCGTGTTCTAGAGCTTGATATGATGAGCGTTGTGGCTGGTACGCGATTCCGTGGTGATTTTGAAGAACGCATGAACCAAA
TCATCTCAGATATTGAGGAAGACGGTCATATTATTCTTTTCATTGACGAAGTGCATACGATTATGGGTTCAGGCTCTGGA
ATTGACAGCACTTTGGATGCGGCTAATATTCTAAAACCAGCGCTTGCGCGTGGTACGCTTCATATGGTTGGTGCGACAAC
GCAAGAAGAATATCAAAAACATCTTGAAAAAGATGCGGCGCTTTCTCGCCGTTTTGCTAAGATTACCATTGAAGAACCAA
GTGTTGAAGATGCTTACCAAATCTTGCTTGGGTTAAAGAAATCATATGAAGATTTTCATAATGTGGTGATTTCTGATGAA
GCTGTTTTAACGGCTGTCAAAGCTGCGCATCGCTATTTGACAAGTAAAAATCTTCCTGATTCAGCGATTGATTTGCTTGA
TGAAGCAAGTGCAACGGTTCAAGGTTTGGTGAAAAAAGAAGCGCCAGCTATTTTGACACCTGCTGATAAAGCTATTTTGG
AAGGTGATTTCAAATTGGCAACGAAATTGCTGAAAGAGTCACACAAGAAGCCAAATCGTAAACCAACTGCTGTGACAGAA
GATGATATTATGGCAACGCTCAGTCGTTTGTCAGGTATTCCTGTTGAGAAAATGACACAGGCAGATAGTAAGAAATACTT
GAACCTCGAAAAAGAACTCCATAAGCGTGTGATTGGCCAAGATTCAGCTATTTCAGCGATTAGTCGTGCTATTCGTCGTA
ATCAAGCGGGCATTCGTACAGGCAAACGTCCGATTGGATCGTTTATGTTCTTGGGTCCAACGGGTGTTGGTAAAACAGAG
TTGGCTAAAGCACTAGCAGAACTGCTATTTGATGATGAATCTGCTCTTATTCGCTTTGATATGTCTGAGTACATGGAAAA
ATTTGCGGCGAGCCGCCTTAATGGAGCTCCTCCAGGGTATGTCGGTTACGAAGAAGGTGGTGAATTGACTGAAAAAGTTC
GCAACAAACCTTATTCTGTGCTTCTATTTGATGAAGTTGAAAAAGCCCACCCAGATATTTTCAATGTGCTTCTCCAAGTG
TTGGATGACGGTGTGCTGACGGATAGTCGTGGTCGTAAAGTTGATTTTTCAAACACGATTATCATCATGACGTCAAATCT
TGGAGCAACCGCTTTGCGTGATGAAAAGACAGTTGGTTTTGGTGCGCGTGATATGGCTCATGATTATGAGGCAATGCAAA
AACGCATCATGGAAGAACTCAAAAAAGCTTACCGACCTGAATTTATCAACCGTATTGATGAAAAGGTTGTTTTCCACAAC
TTAACTCAAGAAAATATGCGTGATGTCGTGAAAATCATGGTTAAACCATTGATTGCGACACTAGCTGAAAAAGATATTAC
GCTAAAATTCCAACCATCAGCATTGAAATATTTAGCCGAAATTGGATACGACCCAGAAATGGGAGCTCGTCCGCTCCGCC
GTACTCTGCAAGATAAAGTTGAAGATGAATTATCAGAGCTTATTCTATCAGGCGAATTGGCAAGTGGAAATACCCTTAAA
ATCGGCGTTTCTAAAGGGCAACTCAAATTTGATATTGCTTAA
ATGAGTGAGTATTCGATAAAAATGCAAGAGGTTTTCAGTGTTGCTCAATACCAAGCAGCGCGTTTTGAAAGCCCATATTT
AGAAAGTTGGCACGTCCTTTTAGCCATGGTTGCTATCCATGACTCAGTCGCAGGGCTAACATTTGCGGAATACCAAACTA
AAATCGCCTATGAAGAATATGAAGCGGCAGCTGTTTTAGCCATTGGGAAATCACCGTTAACGGATGTTGACAGAGTTCAT
TTTGTAGAGCAATCTAAAGCTCTTAGTGATGTTTTAGCATTTGCTGAGTCTATTTGTCAGGTGACTGGTGGTAACGAAAT
CGGGACAGAACACATGCTTTATGCGATGTTGTTAAACCTTGATTTATTTGCCACACGTTTGTTAGAAGTTGCTGGTTTTA
AAAACAAAGAAGACGGTGACGCTGCTCGTTTGATTGATTTGCGTAAGAGTTTGGCACGTAATGCTGGTTTTACAAAGGAA
AATATCAAAGCTATTCATGAACTTCGTAAGCCGAAAAAATCGACAATGGGCGGTGCTTTTTCTGAAATGATGAAACCACA
GTCAACAGCGGGGGATTTGTCAGATTTCACGCGTGATTTGACAGAGATGGCACGTCAAGGAAAATTAGAACCTGTTATCG
GTCGTGAAAAAGAAATTTCTCGTATGGTGCAGGTGCTTAGTCGCAAAACGAAAAACAATCCAGTTTTAGTAGGGGAAGCT
GGTGTTGGTAAAACGGCTCTTGCTTACGGTTTGGCACAGCGAATTGTCAATGGTGCGATTCCGTATGAACTCCAAGACAT
GCGTGTTCTAGAGCTTGATATGATGAGCGTTGTGGCTGGTACGCGATTCCGTGGTGATTTTGAAGAACGCATGAACCAAA
TCATCTCAGATATTGAGGAAGACGGTCATATTATTCTTTTCATTGACGAAGTGCATACGATTATGGGTTCAGGCTCTGGA
ATTGACAGCACTTTGGATGCGGCTAATATTCTAAAACCAGCGCTTGCGCGTGGTACGCTTCATATGGTTGGTGCGACAAC
GCAAGAAGAATATCAAAAACATCTTGAAAAAGATGCGGCGCTTTCTCGCCGTTTTGCTAAGATTACCATTGAAGAACCAA
GTGTTGAAGATGCTTACCAAATCTTGCTTGGGTTAAAGAAATCATATGAAGATTTTCATAATGTGGTGATTTCTGATGAA
GCTGTTTTAACGGCTGTCAAAGCTGCGCATCGCTATTTGACAAGTAAAAATCTTCCTGATTCAGCGATTGATTTGCTTGA
TGAAGCAAGTGCAACGGTTCAAGGTTTGGTGAAAAAAGAAGCGCCAGCTATTTTGACACCTGCTGATAAAGCTATTTTGG
AAGGTGATTTCAAATTGGCAACGAAATTGCTGAAAGAGTCACACAAGAAGCCAAATCGTAAACCAACTGCTGTGACAGAA
GATGATATTATGGCAACGCTCAGTCGTTTGTCAGGTATTCCTGTTGAGAAAATGACACAGGCAGATAGTAAGAAATACTT
GAACCTCGAAAAAGAACTCCATAAGCGTGTGATTGGCCAAGATTCAGCTATTTCAGCGATTAGTCGTGCTATTCGTCGTA
ATCAAGCGGGCATTCGTACAGGCAAACGTCCGATTGGATCGTTTATGTTCTTGGGTCCAACGGGTGTTGGTAAAACAGAG
TTGGCTAAAGCACTAGCAGAACTGCTATTTGATGATGAATCTGCTCTTATTCGCTTTGATATGTCTGAGTACATGGAAAA
ATTTGCGGCGAGCCGCCTTAATGGAGCTCCTCCAGGGTATGTCGGTTACGAAGAAGGTGGTGAATTGACTGAAAAAGTTC
GCAACAAACCTTATTCTGTGCTTCTATTTGATGAAGTTGAAAAAGCCCACCCAGATATTTTCAATGTGCTTCTCCAAGTG
TTGGATGACGGTGTGCTGACGGATAGTCGTGGTCGTAAAGTTGATTTTTCAAACACGATTATCATCATGACGTCAAATCT
TGGAGCAACCGCTTTGCGTGATGAAAAGACAGTTGGTTTTGGTGCGCGTGATATGGCTCATGATTATGAGGCAATGCAAA
AACGCATCATGGAAGAACTCAAAAAAGCTTACCGACCTGAATTTATCAACCGTATTGATGAAAAGGTTGTTTTCCACAAC
TTAACTCAAGAAAATATGCGTGATGTCGTGAAAATCATGGTTAAACCATTGATTGCGACACTAGCTGAAAAAGATATTAC
GCTAAAATTCCAACCATCAGCATTGAAATATTTAGCCGAAATTGGATACGACCCAGAAATGGGAGCTCGTCCGCTCCGCC
GTACTCTGCAAGATAAAGTTGAAGATGAATTATCAGAGCTTATTCTATCAGGCGAATTGGCAAGTGGAAATACCCTTAAA
ATCGGCGTTTCTAAAGGGCAACTCAAATTTGATATTGCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
77.094 |
99.877 |
0.77 |
| clpC | Streptococcus thermophilus LMG 18311 |
73.497 |
100 |
0.737 |
| clpC | Streptococcus thermophilus LMD-9 |
73.374 |
100 |
0.736 |
| clpC | Streptococcus pneumoniae Rx1 |
67.809 |
100 |
0.681 |
| clpC | Streptococcus pneumoniae D39 |
67.809 |
100 |
0.681 |
| clpC | Streptococcus pneumoniae TIGR4 |
67.857 |
99.877 |
0.678 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.461 |
100 |
0.508 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.546 |
100 |
0.444 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.794 |
78.967 |
0.362 |
| clpE | Streptococcus pneumoniae Rx1 |
45.794 |
78.967 |
0.362 |
| clpE | Streptococcus pneumoniae D39 |
45.794 |
78.967 |
0.362 |
| clpE | Streptococcus pneumoniae R6 |
45.794 |
78.967 |
0.362 |