Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | JGX27_RS03305 | Genome accession | NZ_CP077423 |
| Coordinates | 606728..609016 (-) | Length | 762 a.a. |
| NCBI ID | WP_009853702.1 | Uniprot ID | - |
| Organism | Streptococcus gallolyticus subsp. gallolyticus TX20005 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 601728..614016
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JGX27_RS03290 (JGX27_03290) | ileS | 602729..605527 (+) | 2799 | WP_009853699.1 | isoleucine--tRNA ligase | - |
| JGX27_RS03295 (JGX27_03295) | - | 605629..605931 (-) | 303 | WP_009853700.1 | DUF1827 family protein | - |
| JGX27_RS03300 (JGX27_03300) | - | 606003..606449 (-) | 447 | WP_009853701.1 | NUDIX hydrolase | - |
| JGX27_RS03305 (JGX27_03305) | clpE | 606728..609016 (-) | 2289 | WP_009853702.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| JGX27_RS03310 (JGX27_03310) | - | 609158..609685 (-) | 528 | WP_009853703.1 | DUF3278 domain-containing protein | - |
| JGX27_RS03315 (JGX27_03315) | - | 609713..609922 (-) | 210 | WP_009853704.1 | helix-turn-helix domain-containing protein | - |
| JGX27_RS03320 (JGX27_03320) | argF | 610257..611237 (+) | 981 | WP_043878530.1 | ornithine carbamoyltransferase | - |
| JGX27_RS03325 (JGX27_03325) | - | 611372..611602 (+) | 231 | WP_003063726.1 | DUF1797 family protein | - |
| JGX27_RS03330 (JGX27_03330) | - | 611856..612542 (+) | 687 | WP_009853706.1 | amino acid ABC transporter permease | - |
| JGX27_RS03335 (JGX27_03335) | - | 612542..613276 (+) | 735 | WP_009853707.1 | amino acid ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 762 a.a. Molecular weight: 84808.70 Da Isoelectric Point: 4.7854
>NTDB_id=581501 JGX27_RS03305 WP_009853702.1 606728..609016(-) (clpE) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
MLCQNCHLNESTIHLYTNVNGQQKQIDLCQNCYQIMKTDPNNTILGGLGDAPASSTQNQSTGMNPFDDFFSNLNNFHAFG
GQDFQNTPPTQSGGGNNGGNNNNYRPNGAANQQQQQKGLLEEFGINVTDIARRGDIDPVIGRDAEIIRVIEILNRRTKNN
PVLIGEPGVGKTAVVEGLAQKIVDGNVPQKLQNKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRERKDVILFIDEIHE
IVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILRGIQKKYEDYHH
VKYSDDAIEAAANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPQEIDKRLVEAENLKTQATREEDYERAAYFRDQ
IAKYKEMQQQTINEDDIPVITEKTIEAIVEEKTNIPVGDLKEKEQSQLINLADDLKTHVIGQDDAVDKIAKAIRRNRVGL
GTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPY
SLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKTEASVGFGAAREGRTNSVLGELSNYFS
PEFMNRFDGIIEFKALSKDNLLQIVNLMLDDVNKRLATNDIHLEVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAIT
DFYLENPSEKDLKAVMTSNGKIIIKSAKKVEKEETTVSAESE
MLCQNCHLNESTIHLYTNVNGQQKQIDLCQNCYQIMKTDPNNTILGGLGDAPASSTQNQSTGMNPFDDFFSNLNNFHAFG
GQDFQNTPPTQSGGGNNGGNNNNYRPNGAANQQQQQKGLLEEFGINVTDIARRGDIDPVIGRDAEIIRVIEILNRRTKNN
PVLIGEPGVGKTAVVEGLAQKIVDGNVPQKLQNKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRERKDVILFIDEIHE
IVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILRGIQKKYEDYHH
VKYSDDAIEAAANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPQEIDKRLVEAENLKTQATREEDYERAAYFRDQ
IAKYKEMQQQTINEDDIPVITEKTIEAIVEEKTNIPVGDLKEKEQSQLINLADDLKTHVIGQDDAVDKIAKAIRRNRVGL
GTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPY
SLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKTEASVGFGAAREGRTNSVLGELSNYFS
PEFMNRFDGIIEFKALSKDNLLQIVNLMLDDVNKRLATNDIHLEVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAIT
DFYLENPSEKDLKAVMTSNGKIIIKSAKKVEKEETTVSAESE
Nucleotide
Download Length: 2289 bp
>NTDB_id=581501 JGX27_RS03305 WP_009853702.1 606728..609016(-) (clpE) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
ATGCTCTGTCAAAATTGTCATTTAAACGAATCAACAATTCATCTTTATACAAATGTCAATGGTCAGCAAAAGCAAATTGA
TTTGTGCCAAAACTGCTATCAAATCATGAAAACTGACCCTAACAATACTATTTTAGGTGGCTTAGGAGATGCACCAGCTT
CTTCCACACAAAATCAATCTACTGGTATGAATCCTTTTGATGATTTCTTCAGTAATTTGAATAATTTCCACGCATTCGGT
GGACAAGATTTCCAAAATACGCCTCCAACACAATCAGGTGGTGGAAATAACGGCGGCAATAATAACAATTATCGTCCAAA
CGGCGCAGCTAACCAACAGCAACAACAAAAAGGTTTGCTAGAAGAATTTGGTATCAACGTTACCGATATCGCTCGTCGCG
GTGACATCGACCCTGTCATTGGACGTGATGCCGAAATCATTCGTGTGATTGAAATTCTTAACCGTCGTACAAAAAATAAT
CCTGTTCTTATTGGTGAACCAGGGGTTGGTAAAACAGCCGTTGTTGAAGGATTAGCTCAAAAAATCGTAGATGGTAACGT
TCCACAAAAACTTCAAAATAAACAAGTTATTCGTCTTGATGTCGTTAGCCTTGTACAAGGAACAGGTATTCGTGGTCAAT
TTGAAGAACGTATGCAAAAACTCATGGAAGAAATCCGTGAACGCAAGGACGTTATTCTCTTCATTGACGAAATTCACGAA
ATTGTCGGTGCTGGTTCTGCAGGCGACGGCAACATGGACGCTGGTAATATTTTAAAACCAGCGCTTGCTCGTGGTGAACT
TCAATTAGTTGGTGCTACGACACTCAATGAATACCGCATTATTGAAAAAGATGCAGCGCTTGAACGCCGTATGCAACCTG
TCAAAGTTGATGAACCAAGCGTAGAAGAAACGATTACGATTCTTCGTGGTATTCAAAAGAAATACGAAGATTATCATCAT
GTCAAATACAGCGATGATGCAATTGAGGCTGCCGCAAATCTTTCTAACCGTTACATTCAAGACCGCTTCCTCCCAGATAA
AGCCATTGATTTGCTAGACGAAGCTGGGTCTAAGATGAATTTAACCCTTAACTTTGTTGACCCACAAGAAATTGACAAGC
GTTTAGTGGAAGCTGAAAACCTAAAAACACAAGCTACTCGCGAAGAAGATTATGAACGCGCAGCTTATTTCCGTGACCAA
ATCGCTAAATACAAGGAAATGCAACAACAAACAATCAACGAAGACGATATTCCAGTCATTACTGAAAAGACTATCGAAGC
TATCGTTGAAGAAAAAACTAATATCCCTGTTGGTGATTTGAAAGAAAAGGAACAATCACAATTAATCAATCTCGCTGATG
ATTTGAAAACACACGTCATTGGTCAAGATGATGCCGTCGACAAAATTGCCAAAGCCATTCGTCGTAACCGTGTCGGTCTC
GGTACACCAAATCGTCCAATCGGTTCATTCCTCTTTGTTGGACCAACTGGTGTTGGTAAAACAGAACTTTCTAAACAATT
AGCGATCGAACTTTTCGGCTCAGCTGACAGCATGATTCGTTTCGATATGTCTGAATACATGGAAAAACATGCGGTCGCTA
AACTTGTCGGAGCACCTCCAGGATACGTTGGTTACGAAGAAGCTGGTCAATTGACAGAAAAAGTTCGCCGTAATCCATAC
TCACTCATCCTTCTTGACGAAGTTGAAAAAGCGCATCCTGATGTTATGCATATGTTCTTGCAAGTTCTTGATGACGGTCG
TTTGACTGACGGTCAAGGTCGTACAGTAAGCTTCAAAGATACTATTATTATCATGACTTCTAATGCTGGTACTGGTAAAA
CAGAAGCTTCAGTTGGTTTCGGTGCTGCTCGTGAAGGACGTACAAATTCTGTCCTTGGTGAACTTAGCAACTACTTCAGC
CCTGAATTCATGAACCGTTTCGACGGTATTATCGAATTTAAGGCTCTTAGCAAAGACAATCTTCTCCAAATTGTTAACCT
TATGCTTGACGATGTCAATAAACGTCTAGCAACTAACGATATTCACCTCGAAGTCACTGATAAGGTAAAAGAAAAATTAG
TTGACCTTGGCTACGATCCTAAAATGGGAGCTCGTCCATTACGTCGTACTATCCAAGACCACATTGAAGATGCCATTACA
GACTTCTATCTTGAAAATCCAAGCGAAAAAGATTTGAAAGCTGTTATGACAAGCAATGGTAAAATTATCATCAAATCTGC
TAAAAAAGTTGAAAAAGAAGAAACAACCGTTTCAGCAGAATCAGAATAA
ATGCTCTGTCAAAATTGTCATTTAAACGAATCAACAATTCATCTTTATACAAATGTCAATGGTCAGCAAAAGCAAATTGA
TTTGTGCCAAAACTGCTATCAAATCATGAAAACTGACCCTAACAATACTATTTTAGGTGGCTTAGGAGATGCACCAGCTT
CTTCCACACAAAATCAATCTACTGGTATGAATCCTTTTGATGATTTCTTCAGTAATTTGAATAATTTCCACGCATTCGGT
GGACAAGATTTCCAAAATACGCCTCCAACACAATCAGGTGGTGGAAATAACGGCGGCAATAATAACAATTATCGTCCAAA
CGGCGCAGCTAACCAACAGCAACAACAAAAAGGTTTGCTAGAAGAATTTGGTATCAACGTTACCGATATCGCTCGTCGCG
GTGACATCGACCCTGTCATTGGACGTGATGCCGAAATCATTCGTGTGATTGAAATTCTTAACCGTCGTACAAAAAATAAT
CCTGTTCTTATTGGTGAACCAGGGGTTGGTAAAACAGCCGTTGTTGAAGGATTAGCTCAAAAAATCGTAGATGGTAACGT
TCCACAAAAACTTCAAAATAAACAAGTTATTCGTCTTGATGTCGTTAGCCTTGTACAAGGAACAGGTATTCGTGGTCAAT
TTGAAGAACGTATGCAAAAACTCATGGAAGAAATCCGTGAACGCAAGGACGTTATTCTCTTCATTGACGAAATTCACGAA
ATTGTCGGTGCTGGTTCTGCAGGCGACGGCAACATGGACGCTGGTAATATTTTAAAACCAGCGCTTGCTCGTGGTGAACT
TCAATTAGTTGGTGCTACGACACTCAATGAATACCGCATTATTGAAAAAGATGCAGCGCTTGAACGCCGTATGCAACCTG
TCAAAGTTGATGAACCAAGCGTAGAAGAAACGATTACGATTCTTCGTGGTATTCAAAAGAAATACGAAGATTATCATCAT
GTCAAATACAGCGATGATGCAATTGAGGCTGCCGCAAATCTTTCTAACCGTTACATTCAAGACCGCTTCCTCCCAGATAA
AGCCATTGATTTGCTAGACGAAGCTGGGTCTAAGATGAATTTAACCCTTAACTTTGTTGACCCACAAGAAATTGACAAGC
GTTTAGTGGAAGCTGAAAACCTAAAAACACAAGCTACTCGCGAAGAAGATTATGAACGCGCAGCTTATTTCCGTGACCAA
ATCGCTAAATACAAGGAAATGCAACAACAAACAATCAACGAAGACGATATTCCAGTCATTACTGAAAAGACTATCGAAGC
TATCGTTGAAGAAAAAACTAATATCCCTGTTGGTGATTTGAAAGAAAAGGAACAATCACAATTAATCAATCTCGCTGATG
ATTTGAAAACACACGTCATTGGTCAAGATGATGCCGTCGACAAAATTGCCAAAGCCATTCGTCGTAACCGTGTCGGTCTC
GGTACACCAAATCGTCCAATCGGTTCATTCCTCTTTGTTGGACCAACTGGTGTTGGTAAAACAGAACTTTCTAAACAATT
AGCGATCGAACTTTTCGGCTCAGCTGACAGCATGATTCGTTTCGATATGTCTGAATACATGGAAAAACATGCGGTCGCTA
AACTTGTCGGAGCACCTCCAGGATACGTTGGTTACGAAGAAGCTGGTCAATTGACAGAAAAAGTTCGCCGTAATCCATAC
TCACTCATCCTTCTTGACGAAGTTGAAAAAGCGCATCCTGATGTTATGCATATGTTCTTGCAAGTTCTTGATGACGGTCG
TTTGACTGACGGTCAAGGTCGTACAGTAAGCTTCAAAGATACTATTATTATCATGACTTCTAATGCTGGTACTGGTAAAA
CAGAAGCTTCAGTTGGTTTCGGTGCTGCTCGTGAAGGACGTACAAATTCTGTCCTTGGTGAACTTAGCAACTACTTCAGC
CCTGAATTCATGAACCGTTTCGACGGTATTATCGAATTTAAGGCTCTTAGCAAAGACAATCTTCTCCAAATTGTTAACCT
TATGCTTGACGATGTCAATAAACGTCTAGCAACTAACGATATTCACCTCGAAGTCACTGATAAGGTAAAAGAAAAATTAG
TTGACCTTGGCTACGATCCTAAAATGGGAGCTCGTCCATTACGTCGTACTATCCAAGACCACATTGAAGATGCCATTACA
GACTTCTATCTTGAAAATCCAAGCGAAAAAGATTTGAAAGCTGTTATGACAAGCAATGGTAAAATTATCATCAAATCTGC
TAAAAAAGTTGAAAAAGAAGAAACAACCGTTTCAGCAGAATCAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
85.771 |
98.688 |
0.846 |
| clpE | Streptococcus pneumoniae Rx1 |
84.329 |
98.819 |
0.833 |
| clpE | Streptococcus pneumoniae D39 |
84.329 |
98.819 |
0.833 |
| clpE | Streptococcus pneumoniae R6 |
84.329 |
98.819 |
0.833 |
| clpE | Streptococcus pneumoniae TIGR4 |
84.329 |
98.819 |
0.833 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
76.486 |
99.344 |
0.76 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
50.507 |
90.682 |
0.458 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.32 |
82.021 |
0.396 |
| clpC | Streptococcus pneumoniae Rx1 |
46.802 |
84.121 |
0.394 |
| clpC | Streptococcus pneumoniae D39 |
46.802 |
84.121 |
0.394 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.646 |
84.121 |
0.392 |
| clpC | Streptococcus mutans UA159 |
47.504 |
81.496 |
0.387 |
| clpC | Streptococcus thermophilus LMD-9 |
46.302 |
81.627 |
0.378 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.981 |
81.627 |
0.375 |