Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6L62_RS04720 Genome accession   NZ_CP077411
Coordinates   997695..998321 (+) Length   208 a.a.
NCBI ID   WP_033145121.1    Uniprot ID   A0A263VSI0
Organism   Enterobacter asburiae strain FDAARGOS 1432     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 992695..1003321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L62_RS04700 (I6L62_04700) - 993095..994855 (-) 1761 WP_217072737.1 Lon protease family protein -
  I6L62_RS04705 (I6L62_04705) matP 995042..995494 (+) 453 WP_032658161.1 macrodomain Ter protein MatP -
  I6L62_RS04710 (I6L62_04710) ompA 995558..996613 (-) 1056 WP_023311028.1 porin OmpA -
  I6L62_RS04715 (I6L62_04715) sulA 996968..997477 (-) 510 WP_033145120.1 SOS-induced cell division inhibitor SulA -
  I6L62_RS04720 (I6L62_04720) sxy/tfoX 997695..998321 (+) 627 WP_033145121.1 TfoX/Sxy family DNA transformation protein Regulator
  I6L62_RS04725 (I6L62_04725) yccS 998278..1000440 (-) 2163 WP_033145122.1 YccS family putative transporter -
  I6L62_RS04730 (I6L62_04730) - 1000460..1000906 (-) 447 WP_217072738.1 YccF domain-containing protein -
  I6L62_RS04735 (I6L62_04735) helD 1001030..1003084 (+) 2055 WP_217072739.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23876.44 Da        Isoelectric Point: 9.4588

>NTDB_id=581391 I6L62_RS04720 WP_033145121.1 997695..998321(+) (sxy/tfoX) [Enterobacter asburiae strain FDAARGOS 1432]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=581391 I6L62_RS04720 WP_033145121.1 997695..998321(+) (sxy/tfoX) [Enterobacter asburiae strain FDAARGOS 1432]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGTGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTTCGCGCCTGTG
AAGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCTGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGCTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAACGAAACCGACTCAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATCACCAATGAGGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAAAAC
AAAGCGCTCGGTATTAAGGTTCTCTTCGCACTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A263VSI0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567