Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I6L88_RS08820 Genome accession   NZ_CP077404
Coordinates   1789169..1789942 (+) Length   257 a.a.
NCBI ID   WP_018110249.1    Uniprot ID   -
Organism   Streptococcus mutans strain FDAARGOS 1458     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1784169..1794942
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L88_RS08805 (I6L88_08805) - 1785807..1786469 (-) 663 WP_002262652.1 YoaK family protein -
  I6L88_RS08810 (I6L88_08810) rlmH 1786812..1787291 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I6L88_RS08815 (I6L88_08815) htrA 1787497..1788705 (+) 1209 WP_002262650.1 S1C family serine protease Regulator
  I6L88_RS08820 (I6L88_08820) spo0J 1789169..1789942 (+) 774 WP_018110249.1 ParB/RepB/Spo0J family partition protein Regulator
  I6L88_RS08825 (I6L88_08825) dnaA 1790144..1791502 (+) 1359 WP_002262648.1 chromosomal replication initiator protein DnaA -
  I6L88_RS08830 (I6L88_08830) dnaN 1791658..1792794 (+) 1137 WP_002262647.1 DNA polymerase III subunit beta -
  I6L88_RS08835 (I6L88_08835) - 1793067..1793258 (+) 192 WP_002262646.1 DUF951 domain-containing protein -
  I6L88_RS08840 (I6L88_08840) ychF 1793422..1794537 (+) 1116 WP_002264633.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29623.35 Da        Isoelectric Point: 10.1578

>NTDB_id=581336 I6L88_RS08820 WP_018110249.1 1789169..1789942(+) (spo0J) [Streptococcus mutans strain FDAARGOS 1458]
MMTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVII
KKISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQ
GHARLLLSVEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKKPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLK
ISFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 774 bp        

>NTDB_id=581336 I6L88_RS08820 WP_018110249.1 1789169..1789942(+) (spo0J) [Streptococcus mutans strain FDAARGOS 1458]
ATGATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAAC
TAAAGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTT
TTGGCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATC
AAAAAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGA
AGCCAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGAC
CATATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTGCACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAA
GGACACGCACGACTTCTTTTAAGTGTAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTT
AAGTGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAAAACCTTCAAAAGACATTTTTCTGGCAG
AAAAAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAA
ATTTCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-96)

HTH domain found in ParB protein (HTH_ParB)

(149-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.222

100

0.992