Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   D8S83_RS01610 Genome accession   NZ_AP018349
Coordinates   359347..360192 (+) Length   281 a.a.
NCBI ID   WP_042908629.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GN1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 354347..365192
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D8S83_RS01590 - 354615..356456 (-) 1842 WP_020976951.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  D8S83_RS01595 metC 356425..357585 (-) 1161 WP_000175849.1 cystathionine beta-lyase MetC -
  D8S83_RS01600 - 357582..358685 (-) 1104 WP_000655692.1 PLP-dependent transferase -
  D8S83_RS01610 spo0J 359347..360192 (+) 846 WP_042908629.1 ParB/RepB/Spo0J family partition protein Regulator
  D8S83_RS01615 - 360346..361227 (+) 882 WP_020976953.1 mechanosensitive ion channel family protein -
  D8S83_RS01620 - 361257..361460 (+) 204 WP_000157346.1 DUF951 domain-containing protein -
  D8S83_RS01625 ychF 361472..362569 (+) 1098 WP_020976954.1 redox-regulated ATPase YchF -
  D8S83_RS01630 - 362655..362846 (-) 192 WP_001052483.1 hypothetical protein -
  D8S83_RS01640 rpsF 363090..363386 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  D8S83_RS01645 ssbA 363407..363910 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  D8S83_RS01650 rpsR 363962..364204 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32783.79 Da        Isoelectric Point: 10.0000

>NTDB_id=58132 D8S83_RS01610 WP_042908629.1 359347..360192(+) (spo0J) [Staphylococcus aureus strain GN1]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KVADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=58132 D8S83_RS01610 WP_042908629.1 359347..360192(+) (spo0J) [Staphylococcus aureus strain GN1]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTTTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATAGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGGTTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAATCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(161-210)

ParB/Sulfiredoxin domain (ParB_N)

(22-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.613

92.883

0.377

Multiple sequence alignment