Detailed information
Bioinformatically predicted
Overview
| Name | rcrR | Type | Regulator |
| Locus tag | I6L88_RS04710 | Genome accession | NZ_CP077404 |
| Coordinates | 950189..950623 (-) | Length | 144 a.a. |
| NCBI ID | WP_002263292.1 | Uniprot ID | A0AAX1K4B8 |
| Organism | Streptococcus mutans strain FDAARGOS 1458 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 946639..980554 | 950189..950623 | within | 0 |
Gene organization within MGE regions
Location: 946639..980554
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L88_RS04700 (I6L88_04700) | rcrQ | 946639..948393 (-) | 1755 | WP_002280030.1 | ABC transporter ATP-binding protein | Regulator |
| I6L88_RS04705 (I6L88_04705) | rcrP | 948383..950185 (-) | 1803 | WP_002280031.1 | ABC transporter ATP-binding protein | Regulator |
| I6L88_RS04710 (I6L88_04710) | rcrR | 950189..950623 (-) | 435 | WP_002263292.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| I6L88_RS04715 (I6L88_04715) | queC | 951175..951828 (+) | 654 | WP_002263291.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| I6L88_RS04720 (I6L88_04720) | queD | 951828..952274 (+) | 447 | WP_002263290.1 | 6-carboxytetrahydropterin synthase QueD | - |
| I6L88_RS04725 (I6L88_04725) | queE | 952271..952987 (+) | 717 | WP_002263289.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| I6L88_RS04730 (I6L88_04730) | queF | 953000..953488 (+) | 489 | WP_002280032.1 | preQ(1) synthase | - |
| I6L88_RS04735 (I6L88_04735) | - | 953597..953980 (+) | 384 | WP_002265142.1 | DUF3021 family protein | - |
| I6L88_RS04740 (I6L88_04740) | gdhA | 954092..955441 (-) | 1350 | WP_002280033.1 | NADP-specific glutamate dehydrogenase | - |
| I6L88_RS04745 (I6L88_04745) | - | 956088..956597 (+) | 510 | WP_002262901.1 | DUF308 domain-containing protein | - |
| I6L88_RS04750 (I6L88_04750) | gtfD | 956769..961157 (-) | 4389 | WP_002280370.1 | glucosyltransferase-S | - |
| I6L88_RS04755 (I6L88_04755) | - | 961378..962298 (-) | 921 | WP_002280369.1 | AEC family transporter | - |
| I6L88_RS04760 (I6L88_04760) | - | 962414..964186 (-) | 1773 | WP_002280368.1 | ABC transporter ATP-binding protein | - |
| I6L88_RS04765 (I6L88_04765) | - | 964197..965933 (-) | 1737 | WP_002280367.1 | ABC transporter ATP-binding protein | - |
| I6L88_RS04770 (I6L88_04770) | - | 966390..968258 (-) | 1869 | WP_002280366.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| I6L88_RS04775 (I6L88_04775) | - | 968261..969466 (-) | 1206 | WP_002266717.1 | CCA tRNA nucleotidyltransferase | - |
| I6L88_RS04780 (I6L88_04780) | dapB | 969463..970230 (-) | 768 | WP_002262893.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| I6L88_RS04785 (I6L88_04785) | - | 970242..971087 (-) | 846 | WP_002266545.1 | DegV family protein | - |
| I6L88_RS04790 (I6L88_04790) | - | 971093..971467 (-) | 375 | WP_002262891.1 | DUF1149 family protein | - |
| I6L88_RS04795 (I6L88_04795) | - | 971576..973117 (-) | 1542 | WP_002280365.1 | hypothetical protein | - |
| I6L88_RS04800 (I6L88_04800) | - | 973104..973820 (-) | 717 | WP_002265102.1 | ABC transporter ATP-binding protein | - |
| I6L88_RS04805 (I6L88_04805) | - | 973895..974500 (-) | 606 | WP_002280364.1 | TetR/AcrR family transcriptional regulator | - |
| I6L88_RS04810 (I6L88_04810) | - | 974663..975166 (-) | 504 | WP_002280363.1 | phosphatase PAP2 family protein | - |
| I6L88_RS04815 (I6L88_04815) | - | 975407..976486 (-) | 1080 | WP_002262882.1 | serine hydrolase | - |
| I6L88_RS04820 (I6L88_04820) | galE | 976752..977753 (-) | 1002 | WP_002269393.1 | UDP-glucose 4-epimerase GalE | - |
| I6L88_RS04825 (I6L88_04825) | galT | 977902..979377 (-) | 1476 | WP_002280362.1 | UDP-glucose--hexose-1-phosphate uridylyltransferase | - |
| I6L88_RS04830 (I6L88_04830) | - | 979382..980554 (-) | 1173 | WP_002280361.1 | galactokinase | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 16720.58 Da Isoelectric Point: 10.5126
>NTDB_id=581308 I6L88_RS04710 WP_002263292.1 950189..950623(-) (rcrR) [Streptococcus mutans strain FDAARGOS 1458]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE
Nucleotide
Download Length: 435 bp
>NTDB_id=581308 I6L88_RS04710 WP_002263292.1 950189..950623(-) (rcrR) [Streptococcus mutans strain FDAARGOS 1458]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGGAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGGAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrR | Streptococcus mutans UA159 |
100 |
100 |
1 |