Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   I6L25_RS18045 Genome accession   NZ_CP077398
Coordinates   3838856..3839740 (+) Length   294 a.a.
NCBI ID   WP_004711855.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain FDAARGOS 1395     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3833856..3844740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L25_RS18020 (I6L25_18020) - 3834248..3835495 (-) 1248 WP_002050751.1 YihY family inner membrane protein -
  I6L25_RS18025 (I6L25_18025) wrbA 3835776..3836378 (+) 603 WP_004711852.1 NAD(P)H:quinone oxidoreductase -
  I6L25_RS18030 (I6L25_18030) - 3836433..3837008 (-) 576 WP_002050789.1 xanthine phosphoribosyltransferase -
  I6L25_RS18035 (I6L25_18035) - 3837080..3837793 (-) 714 WP_002050776.1 DUF3108 domain-containing protein -
  I6L25_RS18040 (I6L25_18040) - 3837951..3838622 (-) 672 WP_002050771.1 hypothetical protein -
  I6L25_RS18045 (I6L25_18045) tonB2 3838856..3839740 (+) 885 WP_004711855.1 energy transducer TonB Machinery gene
  I6L25_RS18050 (I6L25_18050) ybeY 3839829..3840305 (-) 477 WP_004711856.1 rRNA maturation RNase YbeY -
  I6L25_RS18055 (I6L25_18055) - 3840315..3841403 (-) 1089 WP_002050786.1 PhoH family protein -
  I6L25_RS18060 (I6L25_18060) miaB 3841441..3842892 (-) 1452 WP_002050781.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33644.49 Da        Isoelectric Point: 9.4514

>NTDB_id=581206 I6L25_RS18045 WP_004711855.1 3838856..3839740(+) (tonB2) [Acinetobacter nosocomialis strain FDAARGOS 1395]
MLKKRSLSIEPFHYWWQDRVFIVAIILAILLHTFILLIHFAMPAPSEQSTKEIAISVRPTEEIVKHADFLAQADQQGSGT
FRAAHRMSSNSPTPMPTDASTGEAQLDTLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDTNMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=581206 I6L25_RS18045 WP_004711855.1 3838856..3839740(+) (tonB2) [Acinetobacter nosocomialis strain FDAARGOS 1395]
ATGTTGAAAAAAAGAAGTCTTTCTATAGAGCCTTTTCATTATTGGTGGCAAGACCGAGTCTTTATTGTCGCGATAATACT
CGCAATCTTATTGCATACTTTTATACTGCTCATCCATTTTGCGATGCCTGCACCATCAGAACAATCGACTAAAGAAATTG
CGATATCGGTTCGTCCTACAGAAGAGATCGTTAAGCATGCAGACTTTTTAGCTCAAGCAGACCAGCAGGGTTCGGGAACT
TTTCGAGCGGCTCATCGAATGTCCAGTAATTCTCCGACGCCTATGCCGACTGATGCTTCAACTGGCGAAGCTCAGTTAGA
CACTTTGGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTATTAATGACTGTGTTGAGTTGGCAGAAAC
AAGCAGAGGAGAGTCAAAGGAAAAAAGCACTTGAACAGTTACAGAGCCAATTTCAAGCAAAAGCCGCAATGGTCGCGAGC
CTTGAAGCTCAATATTTGCAACGTCAGCAAGATTTCAGCCGCCAACAAAAAATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCCTCAGCAGCTTATCTAGATAAATTCCGTGAAAAAGTAGAGCTTTACGGTAACCGCTATTATCCAGAAGAAG
CCAAGCAGCAACAGCTAAAAGGTGAAGTCCGCCTTATGGTAATTTTAAATGCTCAAGGGGGAATTCGTGCAATTCGTTTA
CTTGAAAGTTCAGGACATCCAGTTTTAGATGAGGCAGCAAAGGCATCAGTACGTCGTGGAGCACCGTTTGGTCGTTTTGA
TACAAATATGAAGGATATTTCCGAGCTACGTATTGTACGTACTTGGCGTTTTGATCCAGCTGAAGCCGAGTTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

94.898

100

0.949