Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | I6L25_RS17265 | Genome accession | NZ_CP077398 |
| Coordinates | 3693336..3693773 (+) | Length | 145 a.a. |
| NCBI ID | WP_004711677.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain FDAARGOS 1395 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3688336..3698773
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L25_RS17245 (I6L25_17245) | - | 3689727..3690614 (+) | 888 | WP_004711671.1 | metal-dependent hydrolase | - |
| I6L25_RS17250 (I6L25_17250) | - | 3690748..3691338 (+) | 591 | WP_002051712.1 | LemA family protein | - |
| I6L25_RS17255 (I6L25_17255) | - | 3691360..3692442 (+) | 1083 | WP_004711673.1 | TPM domain-containing protein | - |
| I6L25_RS17260 (I6L25_17260) | - | 3692436..3692996 (+) | 561 | WP_004711674.1 | TPM domain-containing protein | - |
| I6L25_RS17265 (I6L25_17265) | pilA | 3693336..3693773 (+) | 438 | WP_004711677.1 | pilin | Machinery gene |
| I6L25_RS17270 (I6L25_17270) | - | 3693834..3695144 (+) | 1311 | WP_004711679.1 | O-antigen ligase family protein | - |
| I6L25_RS17275 (I6L25_17275) | - | 3695255..3696883 (+) | 1629 | WP_004711680.1 | PglL family O-oligosaccharyltransferase | - |
| I6L25_RS17280 (I6L25_17280) | bfr | 3696924..3697388 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| I6L25_RS17285 (I6L25_17285) | - | 3697633..3697827 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| I6L25_RS17290 (I6L25_17290) | - | 3698047..3698430 (-) | 384 | WP_002051728.1 | RidA family protein | - |
Sequence
Protein
Download Length: 145 a.a. Molecular weight: 14859.86 Da Isoelectric Point: 7.5911
>NTDB_id=581197 I6L25_RS17265 WP_004711677.1 3693336..3693773(+) (pilA) [Acinetobacter nosocomialis strain FDAARGOS 1395]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLTDITAGKANTETKLAEGLTANLTNATDVGLQASSNAC
SSISVSVATTGLTSIECTLQGTSQISGKKISWERTADSATAGTTGTWRCKTDVADNLRPKSCGAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLTDITAGKANTETKLAEGLTANLTNATDVGLQASSNAC
SSISVSVATTGLTSIECTLQGTSQISGKKISWERTADSATAGTTGTWRCKTDVADNLRPKSCGAS
Nucleotide
Download Length: 438 bp
>NTDB_id=581197 I6L25_RS17265 WP_004711677.1 3693336..3693773(+) (pilA) [Acinetobacter nosocomialis strain FDAARGOS 1395]
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTTATGATCGTTGTAGCGATTATTGGTATTTTAGCAGCGATCGCGAT
TCCTGCTTATCAAAACTATATTGCTAAATCTCAAGTAAGTACAGGACTAACTGATATTACCGCTGGTAAAGCTAATACTG
AAACTAAATTAGCAGAAGGTTTAACTGCTAATTTAACAAATGCTACTGATGTAGGCTTGCAAGCTTCAAGCAATGCTTGT
TCTTCAATTAGTGTGTCAGTTGCTACTACTGGATTAACATCAATTGAATGTACATTACAAGGCACTTCACAAATTAGTGG
CAAGAAAATTTCTTGGGAACGAACAGCTGATAGTGCTACAGCAGGGACTACAGGAACATGGCGTTGTAAAACTGATGTAG
CTGATAATTTACGTCCTAAATCATGTGGTGCATCATAA
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTTATGATCGTTGTAGCGATTATTGGTATTTTAGCAGCGATCGCGAT
TCCTGCTTATCAAAACTATATTGCTAAATCTCAAGTAAGTACAGGACTAACTGATATTACCGCTGGTAAAGCTAATACTG
AAACTAAATTAGCAGAAGGTTTAACTGCTAATTTAACAAATGCTACTGATGTAGGCTTGCAAGCTTCAAGCAATGCTTGT
TCTTCAATTAGTGTGTCAGTTGCTACTACTGGATTAACATCAATTGAATGTACATTACAAGGCACTTCACAAATTAGTGG
CAAGAAAATTTCTTGGGAACGAACAGCTGATAGTGCTACAGCAGGGACTACAGGAACATGGCGTTGTAAAACTGATGTAG
CTGATAATTTACGTCCTAAATCATGTGGTGCATCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
49.66 |
100 |
0.503 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.681 |
97.241 |
0.434 |
| comP | Acinetobacter baylyi ADP1 |
41.333 |
100 |
0.428 |
| pilA | Vibrio cholerae strain A1552 |
41.497 |
100 |
0.421 |
| pilA | Vibrio cholerae C6706 |
41.497 |
100 |
0.421 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.497 |
100 |
0.421 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.958 |
97.931 |
0.421 |
| pilA | Pseudomonas aeruginosa PAK |
38.312 |
100 |
0.407 |