Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   I6L25_RS14365 Genome accession   NZ_CP077398
Coordinates   3072300..3072626 (-) Length   108 a.a.
NCBI ID   WP_002053185.1    Uniprot ID   A0A0A7XV72
Organism   Acinetobacter nosocomialis strain FDAARGOS 1395     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3067300..3077626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L25_RS14345 (I6L25_14345) - 3067398..3068027 (-) 630 WP_004710890.1 FHA domain-containing protein -
  I6L25_RS14350 (I6L25_14350) gspD 3068068..3070344 (-) 2277 WP_004710891.1 type II secretion system secretin GspD -
  I6L25_RS14355 (I6L25_14355) - 3070386..3071225 (-) 840 WP_004710893.1 type II secretion system protein N -
  I6L25_RS14360 (I6L25_14360) gspN 3071225..3071968 (-) 744 WP_004710896.1 type II secretion system protein N -
  I6L25_RS14365 (I6L25_14365) hns 3072300..3072626 (-) 327 WP_002053185.1 H-NS family nucleoid-associated regulatory protein Regulator
  I6L25_RS14370 (I6L25_14370) - 3072821..3073261 (-) 441 WP_004710900.1 acyl-CoA thioesterase -
  I6L25_RS14375 (I6L25_14375) - 3073269..3074462 (-) 1194 WP_004710901.1 hypothetical protein -
  I6L25_RS14380 (I6L25_14380) - 3074472..3075311 (-) 840 WP_004710903.1 hypothetical protein -
  I6L25_RS14385 (I6L25_14385) - 3075320..3076087 (-) 768 WP_004710904.1 uroporphyrinogen-III synthase -
  I6L25_RS14390 (I6L25_14390) hemC 3076092..3077009 (-) 918 WP_199983357.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12478.12 Da        Isoelectric Point: 5.0524

>NTDB_id=581182 I6L25_RS14365 WP_002053185.1 3072300..3072626(-) (hns) [Acinetobacter nosocomialis strain FDAARGOS 1395]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNSE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=581182 I6L25_RS14365 WP_002053185.1 3072300..3072626(-) (hns) [Acinetobacter nosocomialis strain FDAARGOS 1395]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATTGAAGATGCATATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TTGAGTTTGGTGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGCTACCGTAACAAAAACAACTCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGCTGGTTAGTTGCTGAAATCGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A7XV72

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

99.074

100

0.991