Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   I6L25_RS00565 Genome accession   NZ_CP077398
Coordinates   121378..125901 (+) Length   1507 a.a.
NCBI ID   WP_004712090.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain FDAARGOS 1395     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 116378..130901
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L25_RS00540 (I6L25_00540) - 116679..117501 (+) 823 WP_076611894.1 IS5-like element ISAba27 family transposase -
  I6L25_RS00545 (I6L25_00545) pilG 117737..118120 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  I6L25_RS00550 (I6L25_00550) - 118147..118509 (+) 363 WP_002051151.1 PleD family two-component system response regulator -
  I6L25_RS00555 (I6L25_00555) - 118567..119103 (+) 537 WP_002051357.1 chemotaxis protein CheW -
  I6L25_RS00560 (I6L25_00560) - 119150..121230 (+) 2081 Protein_110 methyl-accepting chemotaxis protein -
  I6L25_RS00565 (I6L25_00565) chpA 121378..125901 (+) 4524 WP_004712090.1 hybrid sensor histidine kinase/response regulator Regulator
  I6L25_RS00570 (I6L25_00570) - 125898..126365 (+) 468 WP_002051358.1 hypothetical protein -
  I6L25_RS00575 (I6L25_00575) dapE 126616..127749 (-) 1134 WP_025469382.1 succinyl-diaminopimelate desuccinylase -
  I6L25_RS00580 (I6L25_00580) - 127875..128018 (-) 144 WP_002051109.1 entericidin A/B family lipoprotein -
  I6L25_RS00585 (I6L25_00585) - 128131..129024 (-) 894 WP_004712096.1 DUF1853 family protein -
  I6L25_RS00590 (I6L25_00590) - 129129..129497 (+) 369 WP_002051275.1 YbaN family protein -
  I6L25_RS00595 (I6L25_00595) elsL 129769..130272 (+) 504 WP_000077301.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1507 a.a.        Molecular weight: 171503.06 Da        Isoelectric Point: 4.3481

>NTDB_id=581162 I6L25_RS00565 WP_004712090.1 121378..125901(+) (chpA) [Acinetobacter nosocomialis strain FDAARGOS 1395]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWMQSENTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQTLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETITGLELDYIEQNSLAEPIVEDVDTEIAINLDETLTLFMEEAEEHLTTIHQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSKSDEILLLQEYREFIRDSLELLSKHSSNEQLEARLQQFNQSWDAYVEQ
HGDRTDPLTPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYDV
LLDKPLLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSVHNDLSQQDPASVEPLLNIEP
EPEAAVTVENLSDSADWAVLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGSITHELESIYERLIQKQLVATSPLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQNSNFQPVPVVEVFDSESEIFSEQELISEVLINEIPAEIEPVLTELEVHDDQLVFENVVSELATPVEAITSVTSEENEA
VVEEQDITAVVEQTFLEEAAELLEMADGLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFA
LHHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPAKLTKTDLFSSEPVMTFIQGDGTEPPPM
MGAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAK
HGIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLL
PRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQKVNKPEAGRIELNIQRQGTD
VVVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEEQDILQLIFHPGLSTAEQITQISGRGVGLDVVQSDIKALGGHVSVD
SVYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQ
PMPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFASIGAIAGATILGDGQVCLILDGQNIARQIQS
TPRHKQLNEAVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGF
EVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4524 bp        

>NTDB_id=581162 I6L25_RS00565 WP_004712090.1 121378..125901(+) (chpA) [Acinetobacter nosocomialis strain FDAARGOS 1395]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAAATTTTTGTTGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTATTAAATGAATGGATGCAGTCTGAGAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTCCACACTTTAAAAGGTTCTGGAAGAATGATTGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGACACGCTTAATCGCGTAATCAATCAAACCCTTAAATTGACTCCAGCAATCCAGAGCTA
TGTTCAATTAGTATTTAAGTTCTATTTTCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTTC
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAGCTTTCA
AATACGCTTACTGCCGAAACAATAACTGGGCTTGAGCTAGACTATATTGAGCAAAACTCATTGGCTGAGCCAATTGTTGA
AGATGTAGATACTGAAATTGCAATAAATCTAGATGAAACTTTGACCTTGTTTATGGAAGAGGCAGAGGAGCATTTAACTA
CAATTCATCAGTTCTTAAATCAAGAGCTGCATCAGTATGATAGTTATAATGCCTTAATACGCGCGCTACATACTTTGCGT
GGCAGTTCTGCGATGGCACAGGTCGAAACAATTTTTGAAGCCAGTACCAAAGTTGAGCACTTATTTAAAATACTGTTGCA
AGAAGAACTTTCTTCTAAGTCAGATGAAATTTTATTATTACAAGAATATCGTGAGTTTATTAGAGATAGCTTAGAGCTTC
TATCTAAACATAGTTCAAATGAACAGCTTGAAGCTCGATTGCAGCAGTTTAATCAATCATGGGATGCTTACGTTGAGCAA
CATGGTGACCGAACAGATCCATTAACACCTTCTCATGGTTTGGTATCACAACTATTGTTGTTAGATGTCTCTGAATTGTT
AGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAATGAGTTTCCAGATTATCTTGAACGTCTAAGTGAACAAGCTGATC
TACTGTTACAACATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGTCAATTGAAAGAAAGTTATGATGTA
TTACTTGATAAACCTCTATTATTGCAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTTATTCAATT
GTTCGATGCCTTGGCTGCTGGTCAGCGAGTTGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CCCTACATACTCCGAGCGTACACAATGACCTGTCTCAGCAAGATCCTGCTTCTGTTGAGCCACTACTTAATATCGAACCA
GAGCCAGAAGCTGCTGTTACGGTAGAGAATTTATCAGACTCTGCAGACTGGGCAGTATTAAGCCAGAGTGTACAGCAAGA
TCGCCAATATATTTCCTCTACACAGGTAAATCAAAACTTTGATCCTGACCTTTTAGATATCTTTCTTGAAGAAGCTGATG
AGCTACTTGAGGGAATTGATACCGATCTCAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCCCTGAATAATCTAATG
CGCTATTTGCATACCTTGAAAGGTGGAGCAAATATGGTTCAGGCGACTTATCTAGGTTCGATTACCCATGAATTAGAAAG
CATATATGAGCGTTTAATTCAAAAGCAGTTAGTTGCAACTTCACCTTTAATTGATTTTATCCGTTTAGTACAAGATGACT
TGGCTGACCGTCTGCAAATCATGCGTGAACAACAATTAGATTATGCAGCTCCTTACACAATTAATGCGTTAAAACGAGCA
GGTCAAAACTCTAACTTCCAACCTGTACCAGTGGTTGAAGTATTTGATAGTGAAAGTGAGATCTTCTCTGAACAAGAGCT
GATATCTGAAGTATTAATCAATGAAATACCGGCAGAAATTGAGCCTGTTCTTACAGAATTAGAAGTTCATGATGATCAGC
TGGTATTTGAGAACGTTGTTTCTGAGTTAGCTACGCCAGTTGAAGCAATAACATCCGTTACATCAGAAGAGAATGAAGCG
GTAGTTGAAGAACAGGATATTACGGCTGTTGTTGAGCAGACATTCTTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGA
TGGGCTATTGAAACAATGGTTTGAGCAGCGTACAAACCGAAGTATCTTGCTTCAATTACAAAGAGCTGTGCACAGTTTGA
AGGGTGGTGCACGAATGGTCGGTTTAGAAGCCGTCTACGCGATTGCCTATCAACTCGAAAATACATTCGAACAATTTGCA
CTGCATCACTTCAACTCGAATATTTATGACCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCTATTTTCAAGCA
TAACTATCAGCATTTCGATGGATTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCGGCTA
AGTTAACGAAAACTGATTTGTTTAGCTCAGAACCTGTGATGACTTTCATACAAGGTGATGGTACAGAACCACCACCAATG
ATGGGCGCATGGGAGCAAACAGAACGTCTGGATCAGAACAATGAAATGATCCGTGTTTCAGCCGACTTGATCGAGAAGAT
GATTGACTTGTCTGGTGAGAACTCAATTAACCGTTCACGAATTGAAATGGACTTGAGCCAGTTCGGTCATACATTGGTTG
AAATGGAATTAGCTATTCAACGACTGGCCGATCAGTTACGACGAATGGAAGGCGAGTTAGAAACACAAATTATTGCTAAA
CACGGTATTGAGCATTCTCGCTATACCGACTTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAACCAGTTATCGAA
ATCTCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTCACAAGATCAGAGATACAGAAAGTTTGC
TTTTACAACAGTCGCGTATTCAGGCAGAAATTCAAGAAGGCTTAATGCGAACACGTCTAGTTCCATTTTCACGTTTGTTA
CCGCGTTTGCAGCGAATTGTGCGTCAAACATCTACAGCCTTGAATAGACCTGCTGAGCTTTTCGTAAATAATACCGAAGG
TGAGTTAGACCGTAACATTTTAGAACGCTTAGTGACACCACTCGAGCATATGCTCAGAAATGCAATTGACCATGGTCTAG
AAGACCGGGCACAGCGCCAAAAGGTGAATAAACCGGAAGCAGGGCGTATTGAACTGAACATTCAGCGTCAAGGAACAGAC
GTTGTTGTTGTCTTTAGCGATGATGGACAAGGTATTGATGTTGAAAAAGTGCGCCAAAAAGCACTGCTTGCTGGTCTGAT
CAAGCCAGAACAAGATTTAGAAGAGCAAGATATTCTACAGCTAATTTTCCATCCAGGTTTAAGTACCGCAGAACAGATTA
CTCAGATTTCTGGACGTGGTGTTGGTCTTGATGTCGTACAGAGCGATATTAAAGCTTTAGGTGGACATGTTAGCGTTGAC
TCTGTTTATGGTAAGGGAACAACATTTACGATACGTGTACCGACTACTGTAGCTGTAAGTGATGCCTTAATGGTAAAAGT
GGCAGATCAGCAATTTGCAATTCCACTTGCTCAAATTGATCGAATTGTTCGAGTTTCGCCAGCTTCTTTAGAGCAGTATT
TTGAAAGCCCTAAAGAACTATTTGAATATGAAAATAAGCGATATCCATTACGTTATCTTTCTGAATTTGTTGGTAATCAA
CCAATGCCACGACTAAATGGCATGATGTATTCATTACCTGTCTTAATGATTAAAGCGAACAATGGTCAAACTGTGGCGTT
ACTTGTCGATCAGTTAATTGGTTCTCGAGCTCAAATTGTAGTGAAACCAATTGGTCAACAGTTCGCTAGCATTGGGGCAA
TTGCAGGCGCCACGATTTTAGGTGATGGACAGGTTTGTTTAATTTTAGACGGGCAAAATATTGCACGACAAATTCAGTCT
ACACCGCGTCATAAACAGCTCAATGAAGCAGTATATAGACAACGTGAATCAGACGAGCGCCGCCTCGTTATGATTGTCGA
TGACTCCGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCTAAAGATGGCG
TTGATGCCATAGAACAGCTAGAAAATATTAAGCCGGATTTGATGCTGCTTGATATTGAAATGCCACGTATGGATGGTTTC
GAAGTACTTAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGTGAAAA
ACATCGTGAACGGGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCGTTCCAAGAGGAAGAGCTACTAGAAAATA
TTGATGCTTTACTTGTAGCGTTTGAAAGCGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

92.568

100

0.926