Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6L65_RS19770 Genome accession   NZ_CP077392
Coordinates   4093418..4094044 (-) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter hormaechei strain FDAARGOS 1435     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4088418..4099044
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L65_RS19755 (I6L65_19755) helD 4088657..4090711 (-) 2055 WP_048965560.1 DNA helicase IV -
  I6L65_RS19760 (I6L65_19760) - 4090834..4091280 (+) 447 WP_022647660.1 YccF domain-containing protein -
  I6L65_RS19765 (I6L65_19765) yccS 4091299..4093461 (+) 2163 WP_023299744.1 YccS family putative transporter -
  I6L65_RS19770 (I6L65_19770) sxy/tfoX 4093418..4094044 (-) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  I6L65_RS19775 (I6L65_19775) sulA 4094262..4094771 (+) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  I6L65_RS19780 (I6L65_19780) ompA 4095128..4096180 (+) 1053 WP_017694761.1 porin OmpA -
  I6L65_RS19785 (I6L65_19785) matP 4096246..4096698 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  I6L65_RS19790 (I6L65_19790) - 4096885..4098645 (+) 1761 WP_023305819.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=581101 I6L65_RS19770 WP_023299743.1 4093418..4094044(-) (sxy/tfoX) [Enterobacter hormaechei strain FDAARGOS 1435]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=581101 I6L65_RS19770 WP_023299743.1 4093418..4094044(-) (sxy/tfoX) [Enterobacter hormaechei strain FDAARGOS 1435]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572