Detailed information NTG0581002

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: I6L24_RS11960
• Genome accession: NZ_CP077369
• Coordinates: 2559339..2560535 (-)
• Length: 398 a.a.
• NCBI ID: WP_216986068.1
• Uniprot ID: -
• Organism: Acinetobacter lwoffii strain FDAARGOS 1394
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2554339..2565535

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L24_RS11945 (I6L24_11945)	-	2556356..2557384 (+)	1029	WP_004280421.1	AraC family transcriptional regulator	-
I6L24_RS11950 (I6L24_11950)	gcvH	2557467..2557841 (+)	375	WP_004280423.1	glycine cleavage system protein GcvH	-
I6L24_RS11955 (I6L24_11955)	-	2558082..2559257 (+)	1176	WP_216986067.1	MFS transporter	-
I6L24_RS11960 (I6L24_11960)	pilU	2559339..2560535 (-)	1197	WP_216986068.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
I6L24_RS11965 (I6L24_11965)	-	2561066..2561817 (+)	752	WP_228733318.1	IS5 family transposase	-
I6L24_RS16600	-	2561980..2563128 (+)	1149	WP_228733319.1	acyltransferase family protein	-
I6L24_RS16605	-	2563089..2563919 (+)	831	WP_228733320.1	SGNH hydrolase domain-containing protein	-
I6L24_RS11975 (I6L24_11975)	-	2563999..2564661 (-)	663	Protein_2312	ATPase, T2SS/T4P/T4SS family	-

Sequence

Protein

• Length: 398 a.a.
• Molecular weight: 45123.69 Da
• Isoelectric Point: 6.6224

>NTDB_id=581002 I6L24_RS11960 WP_216986068.1 2559339..2560535(-) (pilU) [Acinetobacter lwoffii strain FDAARGOS 1394]
MFTAELLDEAKKFMHHMLTKVVEYGGSDLFITADFPPSIKHQGLMKPFGQQELTAEKTKLFAYSLMNDKQRKEFETELEC
NFAITVPGVSRFRVNVFQQQLNVGMVIRTITAEIPNFQKLKLPESLKHVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
SNNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLIRTQDGKGRRAAIEIMLNTPLISDLILKGEFHELKAIMAKS
RELGMQTFDQALFDLYNQGEISYEEALRNADSTNELRLQIKLKSNRQDTTVATEATQFTMMQEPKAEEKQAENTSVSE

Nucleotide

• Length: 1197 bp

>NTDB_id=581002 I6L24_RS11960 WP_216986068.1 2559339..2560535(-) (pilU) [Acinetobacter lwoffii strain FDAARGOS 1394]
ATGTTCACGGCAGAATTGTTGGACGAAGCAAAAAAATTCATGCATCACATGCTGACTAAGGTGGTGGAATATGGCGGTTC
AGATTTATTTATTACGGCTGATTTTCCACCTAGTATTAAACATCAGGGCTTAATGAAACCTTTTGGACAGCAGGAACTCA
CGGCTGAAAAAACCAAGCTGTTTGCCTACAGCTTGATGAATGATAAACAGCGTAAAGAATTTGAAACTGAACTCGAGTGC
AATTTTGCCATCACCGTGCCAGGTGTTTCCCGTTTCCGGGTCAATGTGTTCCAGCAACAACTCAATGTCGGCATGGTAAT
TCGTACCATTACTGCAGAAATTCCAAACTTCCAGAAACTGAAATTACCGGAATCGCTGAAACATGTGATTATGGAAAAAC
GCGGACTGGTGCTGGTGGTCGGTGGAACGGGTTCAGGTAAATCAACTTCACTCGCGGCGATGATTGACTACCGTAATGAA
AATTCGGCCGGGCATATCATTACCGTAGAAGACCCGGTTGAATATGTGCATAAACATAAAAAATCCATGATTACTCATCG
TGAAGTCGGAGTGGACTGCCATTCTTGGCATAATGCACTGAAAAATACCTTGCGTCAGGCTCCGGATGTAATTCTGATCG
GGGAAATTCGCGATACTGAAACTATGGAACATGCGATTGCTTTTGCGGAAACTGGCCATTTGTGTTTGGGAACTCTGCAT
TCCAATAATGCCAACCAGACTTTGGATCGGATTATCAACTTCTTCCCTGAAGAACGCCGGAATCAGTTATTGATGGATTT
GTCTTCAAATATGAAGGCAATTATTTCACAGCGTCTGATTCGGACTCAAGATGGTAAAGGCCGTCGGGCAGCGATTGAAA
TCATGCTGAATACGCCTTTGATTTCCGACCTGATCCTGAAAGGCGAGTTTCATGAGCTGAAAGCCATTATGGCTAAATCC
CGTGAACTGGGCATGCAGACCTTTGACCAGGCCTTATTTGACCTGTATAACCAGGGTGAAATTTCTTATGAAGAAGCCTT
GCGCAATGCCGATTCGACCAATGAACTGCGCTTACAAATCAAGCTGAAAAGTAACCGACAGGACACTACCGTAGCCACAG
AGGCAACCCAATTCACCATGATGCAAGAGCCAAAAGCGGAAGAGAAACAAGCAGAGAATACTTCGGTGTCAGAATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (118-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	61.494	87.437	0.538
pilU	Acinetobacter baylyi ADP1	56.196	87.186	0.49
pilU	Vibrio cholerae strain A1552	52.676	89.196	0.47
pilT	Pseudomonas aeruginosa PAK	44.479	81.91	0.364
pilT	Acinetobacter nosocomialis M2	43.636	82.915	0.362
pilT	Acinetobacter baumannii D1279779	43.636	82.915	0.362
pilT	Acinetobacter baumannii strain A118	43.636	82.915	0.362