Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   MTR79_RS08130 Genome accession   NZ_CP094918
Coordinates   1752256..1753035 (-) Length   259 a.a.
NCBI ID   WP_024885652.1    Uniprot ID   A0ACC6UTW0
Organism   Streptomyces sp. BJ20     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1747256..1758035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTR79_RS08120 - 1748109..1749332 (-) 1224 WP_244789630.1 hypothetical protein -
  MTR79_RS08125 - 1749687..1751681 (+) 1995 WP_122212534.1 ATP-dependent DNA helicase -
  MTR79_RS08130 dinR/lexA 1752256..1753035 (-) 780 WP_024885652.1 transcriptional repressor LexA Regulator
  MTR79_RS08135 nrdR 1753623..1754180 (+) 558 WP_086699468.1 transcriptional regulator NrdR -
  MTR79_RS08140 - 1754345..1757239 (+) 2895 WP_189365599.1 vitamin B12-dependent ribonucleotide reductase -
  MTR79_RS08145 - 1757355..1757888 (-) 534 WP_048456247.1 TerD family protein -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 27989.72 Da        Isoelectric Point: 7.0666

>NTDB_id=581002 MTR79_RS08130 WP_024885652.1 1752256..1753035(-) (dinR/lexA) [Streptomyces sp. BJ20]
MTTTADSAAITAQDRSQGRIEPVHAMNEATNPEAHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAASVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=581002 MTR79_RS08130 WP_024885652.1 1752256..1753035(-) (dinR/lexA) [Streptomyces sp. BJ20]
GTGACCACCACCGCAGACAGTGCCGCCATCACTGCCCAGGACCGCTCCCAGGGCCGCATCGAGCCGGTGCATGCGATGAA
CGAAGCCACGAATCCCGAAGCGCACAAGCGCTCCCTGCCGGGCCGACCTCCCGGCATCCGGGCGGACAGTTCCGGACTCA
CCGACCGCCAGCGCCGGGTCATCGAGGTCATCAGGGACTCGGTGCAGCGGCGCGGGTACCCGCCGTCGATGCGGGAGATC
GGCCAGGCGGTCGGGCTCTCCAGCACCTCCTCCGTCGCGCACCAGCTCATGGCGCTGGAGCGCAAGGGTTTCCTGCGCCG
TGACCCGCACCGTCCGCGCGCGTACGAGGTGCGGGGGTCCGACCAGGCCGCGTCCGTGCAGCCGACGGACACCGCCGGCA
AGCCCGCCGCGTCCTACGTGCCGCTGGTCGGCCGGATCGCCGCCGGTGGCCCGATCCTCGCGGAGGAGTCCGTCGAGGAC
GTCTTCCCGCTGCCCCGACAGCTCGTCGGCGACGGTGAGCTGTTCGTGCTGAAGGTCGTGGGTGACTCCATGATCGAGGC
CGCGATCTGCGACGGCGACTGGGTCACGGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTGGCGGCGATGCTCG
ACGGCGAGGCGACCGTGAAGCGGTTCAAGCGGGAGGACGGCCATGTGTGGCTGCTCCCGCACAACGCGGCCTACGAGCCG
ATCCCCGGCGACGACGCGACGATCCTCGGCAAGGTGGTGGCCGTCCTCCGCCGCGTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(51-114)

Peptidase S24-like (Peptidase_S24)

(141-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.972

81.467

0.375