Detailed information NTG0580877

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I6L23_RS12410
• Genome accession: NZ_CP077336
• Coordinates: 2618677..2619318 (+)
• Length: 213 a.a.
• NCBI ID: WP_004645462.1
• Uniprot ID: -
• Organism: Acinetobacter lwoffii strain FDAARGOS 1393
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2613677..2624318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L23_RS12375 (I6L23_12375)	kdsB	2614004..2614765 (+)	762	WP_004645470.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
I6L23_RS12380 (I6L23_12380)	-	2614780..2615760 (+)	981	WP_004645469.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
I6L23_RS12385 (I6L23_12385)	-	2615776..2616117 (+)	342	WP_004645468.1	PilZ domain-containing protein	-
I6L23_RS12390 (I6L23_12390)	-	2616145..2616918 (+)	774	WP_004645467.1	TatD family hydrolase	-
I6L23_RS12395 (I6L23_12395)	-	2616959..2617573 (+)	615	WP_004645466.1	TetR/AcrR family transcriptional regulator	-
I6L23_RS12400 (I6L23_12400)	-	2617588..2618139 (+)	552	WP_004645465.1	type II secretion system protein	-
I6L23_RS12405 (I6L23_12405)	xcpV	2618129..2618680 (+)	552	WP_370940780.1	type II secretion system minor pseudopilin GspI	Machinery gene
I6L23_RS12410 (I6L23_12410)	xcpW	2618677..2619318 (+)	642	WP_004645462.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I6L23_RS12415 (I6L23_12415)	gspK	2619325..2620296 (+)	972	WP_004645461.1	type II secretion system minor pseudopilin GspK	-
I6L23_RS12420 (I6L23_12420)	-	2620449..2621045 (+)	597	WP_004278864.1	6-pyruvoyl trahydropterin synthase family protein	-
I6L23_RS12425 (I6L23_12425)	ung	2621092..2621805 (+)	714	WP_004645460.1	uracil-DNA glycosylase	-
I6L23_RS12430 (I6L23_12430)	-	2621802..2622737 (+)	936	Protein_2393	enoyl-CoA hydratase/isomerase family protein	-
I6L23_RS12435 (I6L23_12435)	-	2622792..2623724 (+)	933	WP_000743272.1	IS5-like element IS17 family transposase	-
I6L23_RS12440 (I6L23_12440)	-	2623780..2623971 (+)	192	Protein_2395	enoyl-CoA hydratase/isomerase family protein	-

Sequence

Protein

• Length: 213 a.a.
• Molecular weight: 24221.39 Da
• Isoelectric Point: 4.5683

>NTDB_id=580877 I6L23_RS12410 WP_004645462.1 2618677..2619318(+) (xcpW) [Acinetobacter lwoffii strain FDAARGOS 1393]
MKPKGFTLVELLVAIAIFAVLSALGWKVFDYIVKTKDQNAVHEQRLGQLQETYQQILRDTVQAVPLTANINGDIQPALVL
QNGRFNFSKTGVTDPLEEGISPDERIEYQYRADEQKLYRLKYRNLNQAGQDQPESSVLLSEVEQFQIIVLNPNELTQWPD
ASADLNQLEHKQRLPKGIKINLTVNGVSYEWMFSLLNTDFLLDTQNTGQPSSE

Nucleotide

• Length: 642 bp

>NTDB_id=580877 I6L23_RS12410 WP_004645462.1 2618677..2619318(+) (xcpW) [Acinetobacter lwoffii strain FDAARGOS 1393]
ATGAAGCCTAAAGGATTTACCCTGGTCGAATTATTGGTTGCGATTGCGATCTTTGCAGTGCTGTCTGCTTTGGGCTGGAA
AGTTTTTGATTATATTGTCAAAACCAAAGATCAAAATGCAGTACATGAACAGCGTCTAGGTCAGCTACAGGAAACCTATC
AGCAAATTTTACGGGATACGGTACAGGCAGTCCCTTTAACGGCCAATATTAATGGTGATATTCAACCGGCTCTGGTTTTG
CAAAATGGCCGTTTTAATTTTAGTAAAACTGGCGTGACTGATCCTCTGGAGGAGGGTATTTCGCCAGATGAACGCATTGA
ATATCAGTATCGGGCCGATGAGCAGAAACTTTATCGCTTGAAATACCGGAATCTAAATCAGGCAGGTCAAGATCAGCCCG
AATCCAGTGTTTTATTGTCGGAAGTGGAACAATTTCAGATCATCGTACTTAATCCGAATGAACTCACGCAATGGCCGGAT
GCTTCTGCTGATCTGAATCAGTTAGAGCATAAACAGCGTTTGCCTAAAGGGATTAAAATCAATTTAACCGTGAATGGTGT
AAGTTATGAATGGATGTTCAGTTTATTGAATACGGACTTTTTGCTTGATACTCAGAACACCGGTCAACCCAGCTCAGAAT
AA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (4-24)

• Type II secretion system (T2SS), protein J (T2SSJ) (58-187)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	59.701	94.366	0.563