Detailed information NTG0580865

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: I6L23_RS08420
• Genome accession: NZ_CP077336
• Coordinates: 1811344..1812402 (+)
• Length: 352 a.a.
• NCBI ID: WP_004644949.1
• Uniprot ID: N9Q4M1
• Organism: Acinetobacter lwoffii strain FDAARGOS 1393
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1806344..1817402

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L23_RS08405 (I6L23_08405)	-	1806398..1807201 (+)	804	WP_004644947.1	putative RNA methyltransferase	-
I6L23_RS08410 (I6L23_08410)	-	1807246..1808550 (-)	1305	WP_004282307.1	IS4 family transposase	-
I6L23_RS08415 (I6L23_08415)	ponA	1808653..1811178 (-)	2526	WP_016806915.1	penicillin-binding protein PBP1a	-
I6L23_RS08420 (I6L23_08420)	pilM	1811344..1812402 (+)	1059	WP_004644949.1	pilus assembly protein PilM	Machinery gene
I6L23_RS08425 (I6L23_08425)	comN	1812402..1813040 (+)	639	WP_004281141.1	PilN domain-containing protein	Machinery gene
I6L23_RS08430 (I6L23_08430)	comO	1813037..1813759 (+)	723	WP_004644950.1	type 4a pilus biogenesis protein PilO	Machinery gene
I6L23_RS08435 (I6L23_08435)	pilP	1813759..1814286 (+)	528	WP_004644951.1	pilus assembly protein PilP	Machinery gene
I6L23_RS08440 (I6L23_08440)	pilQ	1814305..1816458 (+)	2154	WP_004644953.1	type IV pilus secretin PilQ family protein	Machinery gene
I6L23_RS08445 (I6L23_08445)	aroK	1816495..1817031 (+)	537	WP_004644955.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39037.53 Da
• Isoelectric Point: 4.5358

>NTDB_id=580865 I6L23_RS08420 WP_004644949.1 1811344..1812402(+) (pilM) [Acinetobacter lwoffii strain FDAARGOS 1393]
MRRLYRKPNKGLIGVDISSTSVKVLELSVKSGRYWVESYALIPLSENSVVEKNILNPEAVADALGRAINLGNTQSNQAAF
AIPTSMVITKIIEMDADMSDDEREVQIREDAEQYIPFPLDEASLDFEVLPDRLSNPNRVNVLLVATRIENVEARSEVLEI
SSLTPKIADVESFALENAFKVFSDTLPMGVNTVGILDIGHSMTTLSVMQNNKIIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKTRALPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=580865 I6L23_RS08420 WP_004644949.1 1811344..1812402(+) (pilM) [Acinetobacter lwoffii strain FDAARGOS 1393]
GTGCGCAGGTTATATCGTAAACCAAATAAGGGGTTAATAGGAGTCGATATTAGTTCGACTTCTGTTAAGGTTTTAGAGCT
TTCTGTAAAAAGTGGCCGTTACTGGGTAGAAAGCTATGCTTTGATCCCATTATCGGAAAACAGTGTTGTTGAAAAAAACA
TCTTAAACCCAGAAGCAGTCGCTGATGCCCTTGGGCGTGCAATTAATTTGGGCAATACCCAGTCGAATCAGGCCGCTTTT
GCGATTCCTACTTCAATGGTCATCACCAAAATCATTGAGATGGATGCAGACATGTCAGATGATGAACGTGAAGTTCAGAT
TCGTGAAGATGCGGAACAATACATTCCTTTTCCACTCGATGAAGCGAGTCTGGACTTTGAAGTTCTGCCAGACCGCCTTT
CCAATCCGAACCGGGTCAATGTGCTGCTGGTCGCGACACGGATCGAAAATGTCGAAGCACGTTCTGAAGTTTTAGAGATT
AGCAGTCTAACGCCTAAGATTGCAGATGTAGAAAGTTTTGCGCTGGAAAATGCCTTTAAGGTATTTTCGGACACTTTGCC
GATGGGGGTCAATACGGTTGGTATTTTAGACATTGGTCATAGTATGACGACCTTGTCGGTGATGCAGAACAACAAGATTA
TTTATACCCGTGAGCAGGTGTTTGGTGGCAAGCAATTGACTCAGGAAATTCAGAATCGTTATGGATTGTCTTTTGAAGAA
GCTGGACGTGCTAAAAAAACCCGTGCCTTGCCGGATGATTATGATATTGAAGTGCTAGAACCATTTCTGGATGCCGTCGT
ACAACAGGCAGCCCGTTCATTGCAGTTCTTCTTTTCATCTTCTCAGTTTAATGAGATTGACCATATTTTACTGGCCGGCG
GGAATGCCAATATTCCAGGTCTGGCAAAATTATTACAACAAAAACTCGGTTACCGTGTCACGATCGCGAATCCATTTTTG
CAAATGGGCTTTTCTCCTCAAATTGATATTAAAAAAATTGAAAATGACGCGTCATCACTCATGGTTGCATGCGGTTTGGC
ATTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9Q4M1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	85.227	100	0.852
comM	Acinetobacter nosocomialis M2	85.227	100	0.852
comM	Acinetobacter baylyi ADP1	79.261	100	0.793
pilM	Legionella pneumophila strain ERS1305867	39.266	100	0.395