Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   I6L23_RS07810 Genome accession   NZ_CP077336
Coordinates   1678141..1679295 (-) Length   384 a.a.
NCBI ID   WP_004644874.1    Uniprot ID   N8NV81
Organism   Acinetobacter lwoffii strain FDAARGOS 1393     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1673141..1684295
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L23_RS07785 (I6L23_07785) - 1673297..1673896 (-) 600 WP_004644869.1 hypothetical protein -
  I6L23_RS07790 (I6L23_07790) - 1674221..1674766 (-) 546 WP_004281007.1 glutathione peroxidase -
  I6L23_RS07795 (I6L23_07795) - 1674957..1675853 (+) 897 WP_004644871.1 DMT family transporter -
  I6L23_RS07800 (I6L23_07800) - 1676299..1676868 (-) 570 WP_004644872.1 L-threonylcarbamoyladenylate synthase -
  I6L23_RS07805 (I6L23_07805) dprA 1676910..1678049 (-) 1140 WP_004644873.1 DNA-processing protein DprA Machinery gene
  I6L23_RS07810 (I6L23_07810) tsaP 1678141..1679295 (-) 1155 WP_004644874.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6L23_RS07815 (I6L23_07815) def 1679416..1679946 (+) 531 WP_004644875.1 peptide deformylase -
  I6L23_RS07820 (I6L23_07820) - 1680039..1680449 (+) 411 WP_004644876.1 DUF2946 family protein -
  I6L23_RS07825 (I6L23_07825) - 1680522..1682609 (+) 2088 WP_004644877.1 TonB-dependent copper receptor -

Sequence

Protein


Download         Length: 384 a.a.        Molecular weight: 42218.45 Da        Isoelectric Point: 9.0687

>NTDB_id=580857 I6L23_RS07810 WP_004644874.1 1678141..1679295(-) (tsaP) [Acinetobacter lwoffii strain FDAARGOS 1393]
MKKVLKGMPFFSALGFKNQMLALAVCVGVSMGTIHSAEAAPARNVNPPALKANAPNVYVVKKGDTLWDISKRFLKNPVRW
PEIWASNKHVKNPHWIFPGDRLLMCDYQGRPIIGKDEGDGCEGIISRYLGSTSLQPQIRVESLNNTIPVIPLEHIKQWLE
RYTLLAPDSVQGTPYILGTADQRVLAGKGQKVYARGHGLVVGQRYAVYREAEPYVFTDANGKKYTSALELQQVASGIAVR
GEGDVTTLELTDSYNAEVRRGDRVLPEYDPMLPTLFYPTNAENIAAGGQIVRVLGSIGTAARHSVVTIDRGTAHGVQTGH
VFSVNQKGEVVTDPKTKERVQLPGERIGQVMVFKTFDQLSYAYVLESELPIKVGANIQPPLLED

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=580857 I6L23_RS07810 WP_004644874.1 1678141..1679295(-) (tsaP) [Acinetobacter lwoffii strain FDAARGOS 1393]
ATGAAAAAGGTTTTGAAGGGCATGCCATTTTTTAGTGCCTTGGGGTTTAAAAATCAGATGCTGGCACTTGCCGTTTGTGT
CGGCGTCAGTATGGGGACCATTCATTCTGCCGAGGCAGCACCTGCACGCAACGTCAATCCACCGGCATTAAAAGCCAATG
CACCGAACGTTTATGTAGTGAAAAAAGGCGATACGCTTTGGGATATCTCGAAACGCTTCCTGAAAAATCCGGTACGTTGG
CCGGAAATCTGGGCCAGTAATAAGCACGTGAAAAATCCACATTGGATTTTCCCGGGTGACCGCCTGCTGATGTGTGATTA
CCAAGGCCGTCCGATTATTGGTAAAGACGAAGGTGATGGTTGTGAAGGTATTATCAGCCGCTATCTTGGCAGTACTTCTC
TGCAACCCCAGATTCGTGTTGAATCTTTAAATAATACGATTCCCGTGATTCCGCTTGAACATATTAAGCAGTGGCTGGAA
CGCTATACCCTTCTGGCGCCTGATTCAGTTCAGGGCACACCCTACATTCTCGGAACTGCAGATCAGCGCGTACTGGCTGG
CAAAGGTCAGAAAGTCTATGCACGTGGTCACGGCCTGGTAGTGGGTCAACGCTATGCGGTGTATCGTGAAGCTGAACCGT
ATGTATTTACGGATGCAAATGGCAAGAAATATACGTCTGCACTCGAGCTGCAACAGGTGGCATCTGGTATTGCGGTACGT
GGCGAAGGTGATGTCACCACACTTGAACTGACAGATAGTTACAATGCAGAAGTACGTCGTGGTGATCGCGTCTTGCCTGA
ATACGATCCAATGTTACCGACCCTGTTCTATCCGACCAATGCAGAAAATATTGCTGCCGGTGGTCAGATTGTGCGTGTAT
TGGGGTCGATTGGTACAGCAGCACGTCATAGTGTCGTCACCATTGACCGTGGTACGGCACATGGGGTCCAGACGGGTCAT
GTCTTTAGCGTGAATCAAAAAGGTGAAGTGGTGACTGATCCGAAAACCAAAGAACGGGTGCAATTACCGGGCGAGCGTAT
TGGTCAGGTCATGGTATTTAAAACCTTCGATCAATTGAGCTACGCTTATGTGCTGGAAAGTGAATTACCAATCAAGGTTG
GTGCCAACATTCAGCCGCCACTATTAGAAGACTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(58-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N8NV81

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

68.312

100

0.685