Detailed information    

insolico Bioinformatically predicted

Overview


Name   mutX   Type   Machinery gene
Locus tag   STO1_RS04810 Genome accession   NZ_AP018338
Coordinates   952585..953049 (+) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus oralis subsp. tigurinus strain osk_001     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 947585..958049
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STO1_RS04785 (STO1_009290) - 948796..949890 (+) 1095 WP_172843641.1 AI-2E family transporter -
  STO1_RS04790 (STO1_009300) - 950023..950715 (+) 693 WP_096422206.1 YjjG family noncanonical pyrimidine nucleotidase -
  STO1_RS04795 (STO1_009310) - 950739..951032 (+) 294 WP_049478788.1 hypothetical protein -
  STO1_RS04800 (STO1_009320) - 951155..951910 (+) 756 WP_049478789.1 DUF4336 domain-containing protein -
  STO1_RS04805 (STO1_009330) - 951922..952575 (+) 654 WP_096422208.1 uracil-DNA glycosylase -
  STO1_RS04810 (STO1_009340) mutX 952585..953049 (+) 465 WP_001135768.1 NUDIX hydrolase Machinery gene
  STO1_RS04815 (STO1_009350) - 953062..954330 (+) 1269 WP_070657668.1 dihydroorotase -
  STO1_RS04820 (STO1_009360) - 954372..955712 (+) 1341 WP_096422210.1 MATE family efflux transporter -
  STO1_RS04825 (STO1_009370) - 955891..956859 (+) 969 WP_000105373.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  STO1_RS04830 (STO1_009380) - 956876..957868 (+) 993 WP_008808674.1 alpha-ketoacid dehydrogenase subunit beta -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=58077 STO1_RS04810 WP_001135768.1 952585..953049(+) (mutX) [Streptococcus oralis subsp. tigurinus strain osk_001]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=58077 STO1_RS04810 WP_001135768.1 952585..953049(+) (mutX) [Streptococcus oralis subsp. tigurinus strain osk_001]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAACGGAAAAGAACTGCTCATGCTCCATCGTAATAAGAAGCCCAATGA
TGTCCACGAAGGCAAATGGATTGGTGTGGGTGGTAAGCTAGAGCGAGGTGAGACTCCACAGGAATGTGCAGCGCGTGAAA
TCCTCGAAGAAACAGGGCTCAAAGCCAAGCCGGTTCTAAAAGGTGTTATCACTTTTCCAGAATTCACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGTGACTTGATTGACTGCAACGAGGGAACTTTAGAATGGGTTCC
CTATGATGAAGTTTTGAGCAAGCCAACTTGGGAGGGTGATCACACTTTTGTTGAGTGGCTTTTAGAAGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTATTGGATACCCAAGTTGATTTCTATGAATAA

Domains


Predicted by InterProScan.

(2-127)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987


Multiple sequence alignment