Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6L63_RS13230 Genome accession   NZ_CP077308
Coordinates   2714589..2715215 (-) Length   208 a.a.
NCBI ID   WP_032673551.1    Uniprot ID   A0AAX3Z756
Organism   Enterobacter hormaechei strain FDAARGOS 1433     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2709589..2720215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L63_RS13215 (I6L63_13215) helD 2709828..2711882 (-) 2055 WP_032673550.1 DNA helicase IV -
  I6L63_RS13220 (I6L63_13220) - 2712005..2712451 (+) 447 WP_006809342.1 YccF domain-containing protein -
  I6L63_RS13225 (I6L63_13225) yccS 2712470..2714632 (+) 2163 WP_006809343.1 YccS family putative transporter -
  I6L63_RS13230 (I6L63_13230) sxy/tfoX 2714589..2715215 (-) 627 WP_032673551.1 TfoX/Sxy family DNA transformation protein Regulator
  I6L63_RS13235 (I6L63_13235) sulA 2715433..2715942 (+) 510 WP_032673744.1 SOS-induced cell division inhibitor SulA -
  I6L63_RS13240 (I6L63_13240) ompA 2716299..2717351 (+) 1053 WP_017694761.1 porin OmpA -
  I6L63_RS13245 (I6L63_13245) matP 2717416..2717868 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  I6L63_RS13250 (I6L63_13250) - 2718055..2719815 (+) 1761 WP_006809348.1 AAA family ATPase -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24032.66 Da        Isoelectric Point: 9.4592

>NTDB_id=580734 I6L63_RS13230 WP_032673551.1 2714589..2715215(-) (sxy/tfoX) [Enterobacter hormaechei strain FDAARGOS 1433]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEEMLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=580734 I6L63_RS13230 WP_032673551.1 2714589..2715215(-) (sxy/tfoX) [Enterobacter hormaechei strain FDAARGOS 1433]
ATGAAAAAGATATCCTATGAGCGGATTTATCAATCGCAGGAATACCTCTCTCCGCTGGGTGAAATTCATCATCGCGCCCT
GTTTGGCGGCTACACCCTCGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCTTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAATGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGCCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCTGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATCACCAACGAAGAGATGCTACGACAGTTGGGGGCAAAAACGAGCTGGCTGAAAATGCGCTCTAAAAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTGGAAGGGGCCATCGAAGGGCTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCACAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572