Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6L72_RS07620 Genome accession   NZ_CP077293
Coordinates   1657251..1657874 (+) Length   207 a.a.
NCBI ID   WP_026612357.1    Uniprot ID   A0AAW9LN46
Organism   Klebsiella aerogenes strain FDAARGOS 1442     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1652251..1662874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L72_RS07600 (I6L72_07600) - 1652400..1654157 (-) 1758 WP_015367433.1 AAA family ATPase -
  I6L72_RS07605 (I6L72_07605) matP 1654343..1654795 (+) 453 WP_015367432.1 macrodomain Ter protein MatP -
  I6L72_RS07610 (I6L72_07610) ompA 1654887..1655939 (-) 1053 WP_015704908.1 porin OmpA -
  I6L72_RS07615 (I6L72_07615) sulA 1656292..1656801 (-) 510 WP_015367430.1 SOS-induced cell division inhibitor SulA -
  I6L72_RS07620 (I6L72_07620) sxy/tfoX 1657251..1657874 (+) 624 WP_026612357.1 TfoX/Sxy family DNA transformation protein Regulator
  I6L72_RS07625 (I6L72_07625) yccS 1657862..1659997 (-) 2136 WP_015367427.1 YccS family putative transporter -
  I6L72_RS07630 (I6L72_07630) - 1660015..1660461 (-) 447 WP_015704910.1 YccF domain-containing protein -
  I6L72_RS07635 (I6L72_07635) helD 1660585..1662639 (+) 2055 WP_015704911.1 DNA helicase IV -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23612.33 Da        Isoelectric Point: 10.0181

>NTDB_id=580602 I6L72_RS07620 WP_026612357.1 1657251..1657874(+) (sxy/tfoX) [Klebsiella aerogenes strain FDAARGOS 1442]
MKKISKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSASYRVEHHSPMLMMRKNGRPVALK
YYRIDEALWQDSKMLFHLSQLSLHSARSEKQHQRDSGRLKNLPNISFHMELMLIHAGITDVKMLRTLGAEKSWLKLREHN
KGISINVLESLAGAIAGIHSAALPAQRRQELREWANTQGYSVEDYSG

Nucleotide


Download         Length: 624 bp        

>NTDB_id=580602 I6L72_RS07620 WP_026612357.1 1657251..1657874(+) (sxy/tfoX) [Klebsiella aerogenes strain FDAARGOS 1442]
ATGAAGAAAATTTCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCCCCCTTAGGTAAAATCAGTAGCCGGCCTTT
ATTCGGCGGGTATAGTCTGGCGATTGAAAATACCGTATTCGCCATGGTGGCTGAGGGCGAAATCTATCTTAGGGTTTGCG
AACAAAGCGCCTCTTATCGGGTTGAACATCACAGCCCGATGCTGATGATGCGCAAGAATGGCCGGCCAGTGGCCTTAAAG
TATTACCGGATAGATGAAGCACTATGGCAGGACAGTAAAATGCTGTTTCACCTATCGCAGCTGTCATTGCATTCGGCGCG
AAGCGAAAAGCAGCATCAGCGTGATTCCGGCAGACTAAAGAATTTGCCTAATATCAGCTTCCATATGGAGTTGATGTTGA
TCCATGCCGGAATAACCGATGTGAAAATGCTGCGTACACTCGGGGCGGAAAAGAGCTGGTTAAAATTGAGAGAGCATAAT
AAAGGAATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCATTCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACACAAGGATACAGCGTGGAGGATTATTCCGGTTGA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.777

95.169

0.493