Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6L58_RS04450 Genome accession   NZ_CP077290
Coordinates   938318..938944 (-) Length   208 a.a.
NCBI ID   WP_088207547.1    Uniprot ID   -
Organism   Enterobacter cancerogenus strain FDAARGOS 1428     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 933318..943944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L58_RS04435 (I6L58_04435) helD 933557..935611 (-) 2055 WP_088207545.1 DNA helicase IV -
  I6L58_RS04440 (I6L58_04440) - 935733..936179 (+) 447 WP_006174548.1 YccF domain-containing protein -
  I6L58_RS04445 (I6L58_04445) yccS 936199..938361 (+) 2163 WP_088207546.1 YccS family putative transporter -
  I6L58_RS04450 (I6L58_04450) sxy/tfoX 938318..938944 (-) 627 WP_088207547.1 TfoX/Sxy family DNA transformation protein Regulator
  I6L58_RS04455 (I6L58_04455) sulA 939162..939671 (+) 510 WP_088207548.1 SOS-induced cell division inhibitor SulA -
  I6L58_RS04460 (I6L58_04460) ompA 940027..941079 (+) 1053 WP_127463528.1 porin OmpA -
  I6L58_RS04465 (I6L58_04465) matP 941143..941595 (-) 453 WP_006174540.1 macrodomain Ter protein MatP -
  I6L58_RS04470 (I6L58_04470) - 941782..943542 (+) 1761 WP_006174539.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24043.62 Da        Isoelectric Point: 9.1543

>NTDB_id=580553 I6L58_RS04450 WP_088207547.1 938318..938944(-) (sxy/tfoX) [Enterobacter cancerogenus strain FDAARGOS 1428]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESATYCVKHPASFLTLVKRGRPVLLN
YYRVDEGLWQDRQKLLQLSTYALDAARKERSLRYQRNRLKDLPNLTFQIEVLLYEAGITNEETLRELGAKTSWLKIRSKN
RALSIKVLFALEGAIEGMHEAALPANIRRELTEWFNTLPEVQESRSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=580553 I6L58_RS04450 WP_088207547.1 938318..938944(-) (sxy/tfoX) [Enterobacter cancerogenus strain FDAARGOS 1428]
ATGAAAAAGATATCATATGAACGGATTTATAAATCGCAGGAATATCTCTCCCCTCTGGGGGAAATTCACCACCGGGCGCT
GTTCGGCGGCTACACCCTGGCGGTAGACGATGCGGTGTTTGCCATGGTGTCAGACGGTGAACTTTACCTACGTGCCTGCG
AGGAGAGCGCGACCTATTGCGTTAAGCATCCTGCTTCCTTCTTAACGCTTGTTAAGCGAGGCCGCCCCGTCCTGCTGAAT
TACTATCGCGTGGATGAAGGGCTGTGGCAGGATCGGCAAAAACTGCTTCAGCTTTCCACTTATGCCCTCGATGCGGCACG
AAAAGAGCGTAGCCTGCGCTATCAACGAAACCGGCTCAAGGATCTGCCTAACCTGACTTTCCAGATTGAAGTGTTGCTCT
ACGAAGCCGGCATTACGAATGAAGAGACGTTGCGGGAGCTTGGCGCAAAGACCAGTTGGCTAAAAATCAGATCGAAAAAC
CGGGCCCTCAGTATCAAGGTGCTTTTTGCCCTTGAAGGGGCCATTGAGGGGATGCATGAGGCGGCACTCCCGGCGAACAT
TCGCCGGGAGCTTACGGAGTGGTTTAATACACTGCCTGAGGTGCAGGAGAGTCGTTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

61.576

97.596

0.601