Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   I6L83_RS05505 Genome accession   NZ_CP077270
Coordinates   1138556..1139224 (+) Length   222 a.a.
NCBI ID   WP_033079694.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain FDAARGOS 1453     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1133556..1144224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L83_RS05480 (I6L83_05480) - 1133953..1135086 (+) 1134 WP_033079691.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  I6L83_RS05485 (I6L83_05485) - 1135107..1136042 (+) 936 WP_057504855.1 LCP family protein -
  I6L83_RS05490 (I6L83_05490) - 1136132..1137607 (-) 1476 WP_049395422.1 alkaline phosphatase -
  I6L83_RS05495 (I6L83_05495) - 1138006..1138176 (+) 171 WP_169301455.1 hypothetical protein -
  I6L83_RS05500 (I6L83_05500) - 1138362..1138526 (+) 165 WP_011274729.1 hypothetical protein -
  I6L83_RS05505 (I6L83_05505) braR 1138556..1139224 (+) 669 WP_033079694.1 response regulator transcription factor Regulator
  I6L83_RS05510 (I6L83_05510) braS 1139227..1140123 (+) 897 WP_057504854.1 sensor histidine kinase Regulator
  I6L83_RS05515 (I6L83_05515) - 1140304..1141053 (+) 750 WP_016930644.1 ABC transporter ATP-binding protein -
  I6L83_RS05520 (I6L83_05520) - 1141055..1143046 (+) 1992 WP_037570978.1 ABC transporter permease -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25615.42 Da        Isoelectric Point: 4.5713

>NTDB_id=580506 I6L83_RS05505 WP_033079694.1 1138556..1139224(+) (braR) [Staphylococcus haemolyticus strain FDAARGOS 1453]
MKVFIVEDDFVIAESLEQELSKWNYEVIVAKQFDNIIDVFNANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEITVKDCKLVVDEATLYHEGESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=580506 I6L83_RS05505 WP_033079694.1 1138556..1139224(+) (braR) [Staphylococcus haemolyticus strain FDAARGOS 1453]
ATGAAAGTATTCATCGTGGAAGATGATTTTGTCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTAATGCAAATCAACCACAACTCGTGTTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTGCCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGATTTTATCGAGAAACCATTTAATTTATCGTTAAC
GGTAACTAAGATTCAAGCATTATTACGGAGAACGTATGATTTAGCAGTGTCTAATAATGAAATTACTGTTAAAGATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGGCGAATCGGTTCAATTGTCCTTTACTGAATTACAAATTTTAAAT
ATGTTGTTCCGTAATGAGGGTAAGTATGTTAGCCGTACCGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTGGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.281

99.55

0.779