Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   MUA38_RS06625 Genome accession   NZ_CP094800
Coordinates   1363255..1363878 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain IVB6158     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1358255..1368878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA38_RS06600 (MUA38_06600) rpmG 1359831..1359980 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  MUA38_RS06605 (MUA38_06605) rpsN 1360434..1360703 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  MUA38_RS06610 (MUA38_06610) guaC 1360860..1361837 (+) 978 WP_000688131.1 GMP reductase -
  MUA38_RS06620 (MUA38_06620) - 1361859..1362875 (+) 1017 WP_014532626.1 CAP domain-containing protein -
  MUA38_RS06625 (MUA38_06625) dinR/lexA 1363255..1363878 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  MUA38_RS06630 (MUA38_06630) sosA 1364021..1364254 (+) 234 WP_000499649.1 DNA damage-induced cell division inhibitor SosA -
  MUA38_RS06635 (MUA38_06635) - 1364390..1364629 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  MUA38_RS06640 (MUA38_06640) recP/tkt 1364750..1366738 (+) 1989 WP_000481451.1 transketolase Machinery gene
  MUA38_RS06645 (MUA38_06645) - 1367016..1367258 (+) 243 WP_000246909.1 YneF family protein -
  MUA38_RS06650 (MUA38_06650) - 1367245..1367343 (+) 99 WP_001789897.1 hypothetical protein -
  MUA38_RS06655 (MUA38_06655) - 1367437..1367904 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=580469 MUA38_RS06625 WP_001208755.1 1363255..1363878(-) (dinR/lexA) [Staphylococcus aureus strain IVB6158]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=580469 MUA38_RS06625 WP_001208755.1 1363255..1363878(-) (dinR/lexA) [Staphylococcus aureus strain IVB6158]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGTGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GTTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCTGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACATAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657