Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6L64_RS07940 Genome accession   NZ_CP077264
Coordinates   1631046..1631672 (-) Length   208 a.a.
NCBI ID   WP_069595742.1    Uniprot ID   -
Organism   Enterobacter hormaechei strain FDAARGOS 1434     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1626046..1636672
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L64_RS07925 (I6L64_07925) helD 1626285..1628339 (-) 2055 WP_069595745.1 DNA helicase IV -
  I6L64_RS07930 (I6L64_07930) - 1628462..1628908 (+) 447 WP_015570894.1 YccF domain-containing protein -
  I6L64_RS07935 (I6L64_07935) yccS 1628927..1631089 (+) 2163 WP_069595744.1 YccS family putative transporter -
  I6L64_RS07940 (I6L64_07940) sxy/tfoX 1631046..1631672 (-) 627 WP_069595742.1 TfoX/Sxy family DNA transformation protein Regulator
  I6L64_RS07945 (I6L64_07945) sulA 1631890..1632399 (+) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  I6L64_RS07950 (I6L64_07950) ompA 1632756..1633808 (+) 1053 WP_108376575.1 porin OmpA -
  I6L64_RS07955 (I6L64_07955) matP 1633874..1634326 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  I6L64_RS07960 (I6L64_07960) - 1634513..1636273 (+) 1761 WP_017384808.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24000.60 Da        Isoelectric Point: 9.4592

>NTDB_id=580453 I6L64_RS07940 WP_069595742.1 1631046..1631672(-) (sxy/tfoX) [Enterobacter hormaechei strain FDAARGOS 1434]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKIRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=580453 I6L64_RS07940 WP_069595742.1 1631046..1631672(-) (sxy/tfoX) [Enterobacter hormaechei strain FDAARGOS 1434]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATACGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572